RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 NR1H3Q13133 447 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 HLFQ16534 295 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 ADGRF4Q8IZF3 695 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 KLF6Q99612 283 aaPredicted RBP17.01■□□□□ 0.31
SSRP1-202ENST00000293880 MRPL40Q9NQ50 206 aaKnown RBP17.01■□□□□ 0.31
SSRP1-202ENST00000293880 C20orf96Q9NUD7 363 aaPredicted RBP17.01■□□□□ 0.31
SSRP1-202ENST00000293880 CLCA2Q9UQC9 943 aa17.01■□□□□ 0.31
SSRP1-202ENST00000293880 ARIH1Q9Y4X5 557 aaPredicted RBP17.01■□□□□ 0.31
SSRP1-202ENST00000293880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17■□□□□ 0.31
SSRP1-202ENST00000293880 ZBTB5O15062 677 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 MYBL1P10243 752 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 PPP3CCP48454 512 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 NLRP11P59045 1033 aaKnown RBP17■□□□□ 0.31
SSRP1-202ENST00000293880 CCDC142Q17RM4 750 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 TTC13Q8NBP0 860 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 RMDN3Q96TC7 470 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 TMEM47Q9BQJ4 181 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 BPIFA3Q9BQP9 254 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 AIPL1Q9NZN9 384 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 XPO7Q9UIA9 1087 aaKnown RBP17■□□□□ 0.31
SSRP1-202ENST00000293880 CLEC4FQ8N1N0 589 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 SLC35G2Q8TBE7 412 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 CDHR1Q96JP9 859 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 SH2D3AQ9BRG2 576 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 C17orf80Q9BSJ5 609 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 SPON2Q9BUD6 331 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 PRKAG2Q9UGJ0 569 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 CHORDC1Q9UHD1 332 aaPredicted RBP17■□□□□ 0.31
SSRP1-202ENST00000293880 AIM2O14862 343 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 NUMBP49757 651 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 SHC4Q6S5L8 630 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 OLFML3Q9NRN5 406 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 HMBSP08397 361 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 KIRREL3Q8IZU9 778 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 ATP11CQ8NB49 1132 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 ASIC4Q96FT7 647 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 RNPC3Q96LT9 517 aaKnown RBP17■□□□□ 0.31
SSRP1-202ENST00000293880 TSSK1BQ9BXA7 367 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 SHCBP1LQ9BZQ2 653 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 CD248Q9HCU0 757 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 ANGPT2O15123 496 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 RGS7P49802 495 aa17■□□□□ 0.31
SSRP1-202ENST00000293880 CYP2E1P05181 493 aaPredicted RBP16.99■□□□□ 0.31
SSRP1-202ENST00000293880 IRF1P10914 325 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 SERPINB4P48594 390 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 PCSK7Q16549 785 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 LAYNQ6UX15 382 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 RBM46Q8TBY0 533 aaKnown RBP16.99■□□□□ 0.31
SSRP1-202ENST00000293880 FAM162AQ96A26 154 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 LXNQ9BS40 222 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 BRD8Q9H0E9 1235 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 AFF2P51816 1311 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 CFAP73A6NFT4 308 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 STXBP3O00186 592 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 EFHC2Q5JST6 749 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 SNRNP48Q6IEG0 339 aaKnown RBP16.99■□□□□ 0.31
SSRP1-202ENST00000293880 DCAF4Q8WV16 495 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 AGPAT1Q99943 283 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 ZBED2Q9BTP6 218 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 TBC1D23Q9NUY8 699 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 DEAF1O75398 565 aaPredicted RBP16.99■□□□□ 0.31
SSRP1-202ENST00000293880 TRIM25Q14258 630 aaKnown RBP16.99■□□□□ 0.31
SSRP1-202ENST00000293880 LRRC31Q6UY01 552 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 CDKL3Q8IVW4 592 aaPredicted RBP16.99■□□□□ 0.31
SSRP1-202ENST00000293880 CYFIP2Q96F07 1278 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 THTPAQ9BU02 230 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 ABCD1P33897 745 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 RECQLP46063 649 aaPredicted RBP16.99■□□□□ 0.31
SSRP1-202ENST00000293880 CCDC103Q8IW40 242 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 TRPC7Q9HCX4 862 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 TMEM161AQ9NX61 479 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 DDX56Q9NY93 547 aaKnown RBP16.99■□□□□ 0.31
SSRP1-202ENST00000293880 SYNMO15061 1565 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 CRKP46108 304 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 BCAR1P56945 870 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 MAPK6Q16659 721 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 PID1Q7Z2X4 250 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 STRBPQ96SI9 672 aaKnown RBP16.99■□□□□ 0.31
SSRP1-202ENST00000293880 CHP1Q99653 195 aa16.99■□□□□ 0.31
SSRP1-202ENST00000293880 A8MXQ7 604 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 NMT1P30419 496 aaKnown RBP16.98■□□□□ 0.31
SSRP1-202ENST00000293880 PATL1Q86TB9 770 aaKnown RBP16.98■□□□□ 0.31
SSRP1-202ENST00000293880 ACSF2Q96CM8 615 aaPredicted RBP16.98■□□□□ 0.31
SSRP1-202ENST00000293880 CEP95Q96GE4 821 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 EIF2AK1Q9BQI3 630 aaKnown RBP16.98■□□□□ 0.31
SSRP1-202ENST00000293880 LZTS3O60299 673 aaPredicted RBP16.98■□□□□ 0.31
SSRP1-202ENST00000293880 DLGAP3O95886 979 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 AVPR1AP37288 418 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 TFDP2Q14188 446 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 SLC10A5Q5PT55 438 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 IFNEQ86WN2 208 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 ELMOD1Q8N336 334 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 BEST2Q8NFU1 509 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 OPTNQ96CV9 577 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 VPS50Q96JG6 964 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 SENP1Q9P0U3 644 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 TLR2O60603 784 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 RABGAP1LQ5R372 815 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 RHOT1Q8IXI2 618 aa16.98■□□□□ 0.31
SSRP1-202ENST00000293880 STAG2Q8N3U4 1231 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms