RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 CCDC181Q5TID7 509 aa18.14■□□□□ 0.49
CPSF4-201ENST00000292476 KLHDC7AQ5VTJ3 777 aa18.14■□□□□ 0.49
CPSF4-201ENST00000292476 CDCA2Q69YH5 1023 aaPredicted RBP18.14■□□□□ 0.49
CPSF4-201ENST00000292476 ZPBP2Q6X784 338 aa18.14■□□□□ 0.49
CPSF4-201ENST00000292476 FMNL3Q8IVF7 1028 aa18.14■□□□□ 0.49
CPSF4-201ENST00000292476 METTL13Q8N6R0 699 aa18.14■□□□□ 0.49
CPSF4-201ENST00000292476 AENQ8WTP8 325 aaKnown RBP18.14■□□□□ 0.49
CPSF4-201ENST00000292476 KATNAL1Q9BW62 490 aa18.14■□□□□ 0.49
CPSF4-201ENST00000292476 TLR10Q9BXR5 811 aa18.14■□□□□ 0.49
CPSF4-201ENST00000292476 NFKBIZQ9BYH8 718 aa18.14■□□□□ 0.49
CPSF4-201ENST00000292476 PCIF1Q9H4Z3 704 aa18.14■□□□□ 0.49
CPSF4-201ENST00000292476 STYXL1Q9Y6J8 313 aa18.14■□□□□ 0.49
CPSF4-201ENST00000292476 C22orf31O95567 290 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 GJB1P08034 283 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 ZNF286BP0CG31 522 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 KLRC1P26715 233 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 PRKCIP41743 596 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 VAMP7P51809 220 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 C2orf54Q08AI8 447 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 PPFIA1Q13136 1202 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 MAPK6Q16659 721 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 PRAMEF19Q5SWL8 479 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 GPD1LQ8N335 351 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 FBXL18Q96ME1 805 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 IKZF4Q9H2S9 585 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 PAK6Q9NQU5 681 aaPredicted RBP18.13■□□□□ 0.49
CPSF4-201ENST00000292476 VPS18Q9P253 973 aa18.13■□□□□ 0.49
CPSF4-201ENST00000292476 ANKRD63C9JTQ0 380 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 PMM2O15305 246 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 ADSSP30520 456 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 TNNT3P45378 269 aaPredicted RBP18.12■□□□□ 0.49
CPSF4-201ENST00000292476 FMO5P49326 533 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 RAPGEF1Q13905 1077 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 SNRNP35Q16560 246 aaKnown RBP18.12■□□□□ 0.49
CPSF4-201ENST00000292476 IFI16Q16666 785 aaKnown RBP18.12■□□□□ 0.49
CPSF4-201ENST00000292476 CFAP221Q4G0U5 840 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 DPY19L2P1Q6NXN4 242 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 RHPN2Q8IUC4 686 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 RDH13Q8NBN7 331 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 RNF149Q8NC42 400 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 U2AF1L4Q8WU68 220 aaKnown RBP18.12■□□□□ 0.49
CPSF4-201ENST00000292476 MRPL4Q9BYD3 311 aaKnown RBP18.12■□□□□ 0.49
CPSF4-201ENST00000292476 SPC25Q9HBM1 224 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 SALL4Q9UJQ4 1053 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 NRCAMQ92823 1304 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 ERICH4A6NGS2 130 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 ZNF233A6NK53 670 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 DUSP11O75319 330 aaKnown RBP18.12■□□□□ 0.49
CPSF4-201ENST00000292476 RPS6KA5O75582 802 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 GFPT2O94808 682 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 F2P00734 622 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 RGS19P49795 217 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 NNTQ13423 1086 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 NFRKBQ6P4R8 1299 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 TAS1R3Q7RTX0 852 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 LRRC71Q8N4P6 559 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 TMC2Q8TDI7 906 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 CRACR2AQ9BSW2 395 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 SELENOOQ9BVL4 669 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 FAN1Q9Y2M0 1017 aa18.12■□□□□ 0.49
CPSF4-201ENST00000292476 MKI67P46013 3256 aaKnown RBP18.11■□□□□ 0.49
CPSF4-201ENST00000292476 A0A0U1RQG5 324 aaPredicted RBP18.11■□□□□ 0.49
CPSF4-201ENST00000292476 EXTL3O43909 919 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 SRGAP2CP0DJJ0 459 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 RFX1P22670 979 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 GTF2H1P32780 548 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 PHKA2P46019 1235 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 GJA8P48165 433 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 IGBP1P78318 339 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 MKRN4PQ13434 485 aaPredicted RBP18.11■□□□□ 0.49
CPSF4-201ENST00000292476 GRIK4Q16099 956 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 EMBQ6PCB8 327 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 MTHFD1LQ6UB35 978 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 TRPV1Q8NER1 839 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 VTI1AQ96AJ9 217 aa18.11■□□□□ 0.49
CPSF4-201ENST00000292476 ZEB2O60315 1214 aa18.1■□□□□ 0.49
CPSF4-201ENST00000292476 SGPL1O95470 568 aa18.1■□□□□ 0.49
CPSF4-201ENST00000292476 UCHL3P15374 230 aa18.1■□□□□ 0.49
CPSF4-201ENST00000292476 EPHB4P54760 987 aa18.1■□□□□ 0.49
CPSF4-201ENST00000292476 MEI1Q5TIA1 1274 aa18.1■□□□□ 0.49
CPSF4-201ENST00000292476 SLC39A4Q6P5W5 647 aa18.1■□□□□ 0.49
CPSF4-201ENST00000292476 MFSD14AQ96MC6 490 aa18.1■□□□□ 0.49
CPSF4-201ENST00000292476 PRMT7Q9NVM4 692 aaPredicted RBP18.1■□□□□ 0.49
CPSF4-201ENST00000292476 RNF216Q9NWF9 866 aaPredicted RBP18.1■□□□□ 0.49
CPSF4-201ENST00000292476 GCNT4Q9P109 453 aa18.1■□□□□ 0.49
CPSF4-201ENST00000292476 STIM2Q9P246 746 aa18.1■□□□□ 0.49
CPSF4-201ENST00000292476 AGO2Q9UKV8 859 aaKnown RBP18.1■□□□□ 0.49
CPSF4-201ENST00000292476 INTUQ9ULD6 942 aa18.1■□□□□ 0.49
CPSF4-201ENST00000292476 TISP43B9A030 160 aa18.09■□□□□ 0.49
CPSF4-201ENST00000292476 ADCY6O43306 1168 aa18.09■□□□□ 0.49
CPSF4-201ENST00000292476 TOM1L1O75674 476 aa18.09■□□□□ 0.49
CPSF4-201ENST00000292476 CYBAP13498 195 aa18.09■□□□□ 0.49
CPSF4-201ENST00000292476 PON1P27169 355 aa18.09■□□□□ 0.49
CPSF4-201ENST00000292476 MATR3P43243 847 aaKnown RBP eCLIP18.09■□□□□ 0.49
CPSF4-201ENST00000292476 PTENP60484 403 aa18.09■□□□□ 0.49
CPSF4-201ENST00000292476 MYL7Q01449 175 aa18.09■□□□□ 0.49
CPSF4-201ENST00000292476 DRP2Q13474 957 aa18.09■□□□□ 0.49
CPSF4-201ENST00000292476 IRF2BP2Q7Z5L9 587 aa18.09■□□□□ 0.49
CPSF4-201ENST00000292476 IFNLR1Q8IU57 520 aaPredicted RBP18.09■□□□□ 0.49
CPSF4-201ENST00000292476 LINC01465Q8N7H1 131 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms