RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 DDX1Q92499 740 aaKnown RBP20.73■□□□□ 0.91
BRAF-201ENST00000288602 ALG3Q92685 438 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 ACBD3Q9H3P7 528 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 ERICH4A6NGS2 130 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 SART1O43290 800 aaKnown RBP20.73■□□□□ 0.91
BRAF-201ENST00000288602 MAFO75444 373 aaPredicted RBP20.73■□□□□ 0.91
BRAF-201ENST00000288602 C4BPAP04003 597 aaKnown RBP20.73■□□□□ 0.91
BRAF-201ENST00000288602 SSTR3P32745 418 aaPredicted RBP20.73■□□□□ 0.91
BRAF-201ENST00000288602 TNFSF9P41273 254 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 PIK3CAP42336 1068 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 MARCKSL1P49006 195 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 GUCY2FP51841 1108 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 MKRN4PQ13434 485 aaPredicted RBP20.73■□□□□ 0.91
BRAF-201ENST00000288602 RHOT2Q8IXI1 618 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 AFAP1L1Q8TED9 768 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 EFCC1Q9HA90 598 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 C1orf112Q9NSG2 853 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 AMACRQ9UHK6 382 aa20.73■□□□□ 0.91
BRAF-201ENST00000288602 VNN1O95497 513 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 RFC5P40937 340 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 CDR2Q01850 454 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 MKRN3Q13064 507 aaKnown RBP20.72■□□□□ 0.91
BRAF-201ENST00000288602 ZACNQ401N2 412 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 PHLDB2Q86SQ0 1253 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 RUBCNQ92622 972 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 KRT35Q92764 455 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 SPATA33Q96N06 139 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 ZNF408Q9H9D4 720 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 LRRC37A2A6NM11 1700 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 ADCY3O60266 1144 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 C2CD6Q53TS8 623 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 CELF3Q5SZQ8 465 aaKnown RBP20.72■□□□□ 0.91
BRAF-201ENST00000288602 USP50Q70EL3 339 aaPredicted RBP20.72■□□□□ 0.91
BRAF-201ENST00000288602 DDX42Q86XP3 938 aaKnown RBP eCLIP20.72■□□□□ 0.91
BRAF-201ENST00000288602 OR5B17Q8NGF7 314 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 KIAA1586Q9HCI6 787 aa20.72■□□□□ 0.91
BRAF-201ENST00000288602 A0A0B4J269 797 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 ZBTB42B2RXF5 422 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 GRIN3BO60391 1043 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 GZMAP12544 262 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 CLDN10P78369 228 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 GJC2Q5T442 439 aaPredicted RBP20.71■□□□□ 0.91
BRAF-201ENST00000288602 DHX37Q8IY37 1157 aaKnown RBP20.71■□□□□ 0.91
BRAF-201ENST00000288602 ZNF653Q96CK0 615 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 RNPC3Q96LT9 517 aaKnown RBP20.71■□□□□ 0.91
BRAF-201ENST00000288602 DNAJC25-GNG10A0A024R161 153 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 GOLGA6BA6NDN3 693 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 RNF40O75150 1001 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 OSBPP22059 807 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 AARSP49588 968 aaKnown RBP eCLIP20.71■□□□□ 0.91
BRAF-201ENST00000288602 SLFN12LQ6IEE8 588 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 FAM71BQ8TC56 605 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 TCHPQ9BT92 498 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 NUP85Q9BW27 656 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 CELF4Q9BZC1 486 aaKnown RBP20.71■□□□□ 0.91
BRAF-201ENST00000288602 KCNG1Q9UIX4 513 aa20.71■□□□□ 0.91
BRAF-201ENST00000288602 PIGRP01833 764 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 COMTP21964 271 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 TNFRSF8P28908 595 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 ERVK-9P63128 1117 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 GCNT1Q02742 428 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 WDR44Q5JSH3 913 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 RNF149Q8NC42 400 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 FAM212AQ96EL1 285 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 APOBEC3GQ9HC16 384 aaKnown RBP20.7■□□□□ 0.9
BRAF-201ENST00000288602 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.7■□□□□ 0.9
BRAF-201ENST00000288602 UMODL1Q5DID0 1318 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 ADGRA2Q96PE1 1338 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 ABCD1P33897 745 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 LAMTOR4Q0VGL1 99 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 CDR2LQ86X02 465 aaPredicted RBP20.7■□□□□ 0.9
BRAF-201ENST00000288602 CPA5Q8WXQ8 436 aa20.7■□□□□ 0.9
BRAF-201ENST00000288602 CLDN3O15551 220 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 TXNP10599 105 aaKnown RBP20.69■□□□□ 0.9
BRAF-201ENST00000288602 LLGL2Q6P1M3 1020 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 EMBQ6PCB8 327 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 FASTKD5Q7L8L6 764 aaKnown RBP20.69■□□□□ 0.9
BRAF-201ENST00000288602 RHPN2Q8IUC4 686 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 ZNF564Q8TBZ8 553 aaPredicted RBP20.69■□□□□ 0.9
BRAF-201ENST00000288602 BBXQ8WY36 941 aaPredicted RBP20.69■□□□□ 0.9
BRAF-201ENST00000288602 TMEM134Q9H6X4 195 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 ERVK-5Q9HDB9 667 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 MED4Q9NPJ6 270 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 TRPC6Q9Y210 931 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 CNTNAP2Q9UHC6 1331 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 MSCO60682 206 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 CFHP08603 1231 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 POTEJP0CG39 1038 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 PLCB4Q15147 1175 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 ARMC9Q7Z3E5 817 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 CALR3Q96L12 384 aaKnown RBP20.69■□□□□ 0.9
BRAF-201ENST00000288602 CENPFP49454 3210 aa20.69■□□□□ 0.9
BRAF-201ENST00000288602 SIP14410 1827 aa20.68■□□□□ 0.9
BRAF-201ENST00000288602 TTI1O43156 1089 aa20.68■□□□□ 0.9
BRAF-201ENST00000288602 CCDC62Q6P9F0 684 aa20.68■□□□□ 0.9
BRAF-201ENST00000288602 MPHOSPH6Q99547 160 aaKnown RBP20.68■□□□□ 0.9
BRAF-201ENST00000288602 FAM204AQ9H8W3 233 aa20.68■□□□□ 0.9
BRAF-201ENST00000288602 LDHAP00338 332 aaKnown RBP20.68■□□□□ 0.9
BRAF-201ENST00000288602 CYP2C19P33261 490 aa20.68■□□□□ 0.9
BRAF-201ENST00000288602 HADHBP55084 474 aaKnown RBP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms