RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 COG2Q14746 738 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 SF3B3Q15393 1217 aaKnown RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 YAF2Q8IY57 180 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 SAC3D1A6NKF1 404 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 PDAP1Q13442 181 aaKnown RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 USP39Q53GS9 565 aaKnown RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 SPATA21Q7Z572 469 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 XXYLT1Q8NBI6 393 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 TSEN34Q9BSV6 310 aaKnown RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 EPN3Q9H201 632 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 CACNB1Q02641 598 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 STX3Q13277 289 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 CC2D2BQ6DHV5 1058 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 TTC33Q6PID6 262 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 ADCK2Q7Z695 626 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 KLHL2O95198 593 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 MYL3P08590 195 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 ZNF568Q3ZCX4 644 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 RHOT1Q8IXI2 618 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 OSBPL9Q96SU4 736 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 SPRTNQ9H040 489 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 FAM47E-STBD1D6RA91 191 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 SLC16A1P53985 500 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 VSNL1P62760 191 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 SLC27A3Q5K4L6 730 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 DCAF4Q8WV16 495 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 PPP1R16BQ96T49 567 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 DNAJC12Q9UKB3 198 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 ZNF839A8K0R7 811 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 PLA2G4AP47712 749 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 MRPS35P82673 323 aaKnown RBP9.18□□□□□ -0.94
NIPBL-201ENST00000282516 KRT76Q01546 638 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 STAT4Q14765 748 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 MTFR1Q15390 333 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 DDHD1Q8NEL9 900 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 YIPF2Q9BWQ6 316 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 SYNDIG1Q9H7V2 258 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 KRT84Q9NSB2 600 aa9.18□□□□□ -0.94
NIPBL-201ENST00000282516 CLDN3O15551 220 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 ANXA11P50995 505 aaKnown RBP9.17□□□□□ -0.94
NIPBL-201ENST00000282516 HEMGNQ9BXL5 484 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 LATS2Q9NRM7 1088 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 NMRK1Q9NWW6 199 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 APPL1Q9UKG1 709 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 INSRP06213 1382 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 AATKQ6ZMQ8 1374 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 TRIM24O15164 1050 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 PSMD3O43242 534 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 MARK3P27448 753 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 PKN2Q16513 984 aaKnown RBP9.17□□□□□ -0.94
NIPBL-201ENST00000282516 TRIM65Q6PJ69 517 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 GPR141Q7Z602 305 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 EXD1Q8NHP7 514 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 RIC8BQ9NVN3 520 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 GDAQ9Y2T3 454 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 ERBB4Q15303 1308 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 ANKRD12Q6UB98 2062 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 CHL1O00533 1208 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 ALBP02768 609 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 PTH1RQ03431 593 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 ARMC6Q6NXE6 501 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 LONP2Q86WA8 852 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 LRRC49Q8IUZ0 686 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 CALML6Q8TD86 181 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 PKP3Q9Y446 797 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 MAP3K19Q56UN5 1328 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 UBN2Q6ZU65 1347 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 CCND1P24385 295 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 MAPK6Q16659 721 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 ENOSF1Q7L5Y1 443 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 CCDC60Q8IWA6 550 aaPredicted RBP9.17□□□□□ -0.94
NIPBL-201ENST00000282516 PPP2R3CQ969Q6 453 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 ZNF560Q96MR9 790 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 PLEKHA5Q9HAU0 1116 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 ABHD10Q9NUJ1 306 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 PSMC3IPQ9P2W1 217 aaPredicted RBP9.17□□□□□ -0.94
NIPBL-201ENST00000282516 BCS1LQ9Y276 419 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 URB1O60287 2271 aaKnown RBP9.17□□□□□ -0.94
NIPBL-201ENST00000282516 EVPLLA8MZ36 301 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 UNC13DQ70J99 1090 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 GRAMD1CQ8IYS0 662 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 CASP10Q92851 521 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 IARS2Q9NSE4 1012 aaKnown RBP9.17□□□□□ -0.94
NIPBL-201ENST00000282516 SERPINB13Q9UIV8 391 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 ABCC4O15439 1325 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 RGS4P49798 205 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 SERPINB9P50453 376 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 TPI1P60174 286 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 CUL4AQ13619 759 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 P3H2Q8IVL5 708 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 C10orf53Q8N6V4 93 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 AGR3Q8TD06 166 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 QKIQ96PU8 341 aaKnown RBP eCLIP9.17□□□□□ -0.943e-7■■■■■ 27
NIPBL-201ENST00000282516 ADAMTS1Q9UHI8 967 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 MYO5CQ9NQX4 1742 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 ACTR2P61160 394 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 KBTBD12Q3ZCT8 623 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 FAM102AQ5T9C2 384 aaPredicted RBP9.17□□□□□ -0.94
NIPBL-201ENST00000282516 PGBD4Q96DM1 585 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms