RNA–Protein interactions for RNA: ENST00000281171.8

PTPRO-201, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRO, Length 5,301 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-201ENST00000281171 SMYD2Q9NRG4 433 aa15.15■□□□□ 0.02
PTPRO-201ENST00000281171 PRR36Q9H6K5 1346 aa15.15■□□□□ 0.02
PTPRO-201ENST00000281171 NCOA3Q9Y6Q9 1424 aa15.15■□□□□ 0.02
PTPRO-201ENST00000281171 FGFR4P22455 802 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 PTPREP23469 700 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 A0A1B0GTH6 734 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 FAM170AA1A519 330 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 A8MXQ7 604 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 GUCY1B2O75343 617 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 CDH3P22223 829 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 KRT27Q7Z3Y8 459 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 LMTK2Q8IWU2 1503 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 LRRC47Q8N1G4 583 aaKnown RBP15.14■□□□□ 0.01
PTPRO-201ENST00000281171 CYGBQ8WWM9 190 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 CACYBPQ9HB71 228 aaKnown RBP15.14■□□□□ 0.01
PTPRO-201ENST00000281171 IPO11Q9UI26 975 aaKnown RBP15.14■□□□□ 0.01
PTPRO-201ENST00000281171 CHD1O14646 1710 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 TRPM1Q7Z4N2 1603 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 ADGRB3O60242 1522 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 SAT1P21673 171 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 CLK1P49759 484 aaKnown RBP15.14■□□□□ 0.01
PTPRO-201ENST00000281171 LRRC63Q05C16 580 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 RAD9BQ6WBX8 426 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 CAVIN3Q969G5 261 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 DNAAF2Q9NVR5 837 aaKnown RBP15.14■□□□□ 0.01
PTPRO-201ENST00000281171 CYP39A1Q9NYL5 469 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 TLR3O15455 904 aaKnown RBP15.14■□□□□ 0.01
PTPRO-201ENST00000281171 BCL10O95999 233 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 MYL7Q01449 175 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 KIAA1755Q5JYT7 1200 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 ALKBH8Q96BT7 664 aaKnown RBP15.14■□□□□ 0.01
PTPRO-201ENST00000281171 PPCSQ9HAB8 311 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 DBR1Q9UK59 544 aaKnown RBP15.14■□□□□ 0.01
PTPRO-201ENST00000281171 FBXO9Q9UK97 447 aaPredicted RBP15.14■□□□□ 0.01
PTPRO-201ENST00000281171 BCS1LQ9Y276 419 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 NDUFB9Q9Y6M9 179 aa15.14■□□□□ 0.01
PTPRO-201ENST00000281171 ALX1Q15699 326 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 CCDC28BQ9BUN5 200 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 KLHL20Q9Y2M5 609 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 ATP8B3O60423 1300 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 PEX5P50542 639 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 GFPT1Q06210 699 aaPredicted RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 TRMT5Q32P41 509 aaKnown RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 SYCP2LQ5T4T6 812 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 BBS5Q8N3I7 341 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 DEPDC1BQ8WUY9 529 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 SEPT1Q8WYJ6 367 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 ALDH8A1Q9H2A2 487 aaPredicted RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 C6orf203Q9P0P8 240 aaPredicted RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 RNF17Q9BXT8 1623 aaKnown RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 FRMPD2Q68DX3 1309 aaPredicted RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 MED7O43513 233 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 BAIAP3O94812 1187 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 MCL1Q07820 350 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 SYDE2Q5VT97 1194 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 LRRC8EQ6NSJ5 796 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 ZNF786Q8N393 782 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 ZCCHC7Q8N3Z6 543 aaKnown RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 ZNF579Q8NAF0 562 aaKnown RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 GIMAP8Q8ND71 665 aaPredicted RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 MASTLQ96GX5 879 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 ANKRD36BP1Q96IX9 119 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 PALLDQ8WX93 1383 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 PNMA6FA0A0J9YX94 578 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 MATN2O00339 956 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 LZTS3O60299 673 aaPredicted RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 ALOX15P16050 662 aaPredicted RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 RXRBP28702 533 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 RUNX1T1Q06455 604 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 GRM1Q13255 1194 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 NCAPHQ15003 741 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 TMEM179Q6ZVK1 233 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 SCUBE1Q8IWY4 988 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 JADE3Q92613 823 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 SUGT1Q9Y2Z0 365 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 IPPQ9Y573 584 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 TCP10L2B9ZVM9 353 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 PRR23D1E9PI22 279 aaPredicted RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 CNOT3O75175 753 aaKnown RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 PRR23D2P0DMB1 279 aaPredicted RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 COPB2P35606 906 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 SPOPLQ6IQ16 392 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 IYDQ6PHW0 289 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 NCAPG2Q86XI2 1143 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 DRAXINQ8NBI3 349 aaPredicted RBP15.13■□□□□ 0.01
PTPRO-201ENST00000281171 ZNF577Q9BSK1 485 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 TRIM39Q9HCM9 518 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 FBXO40Q9UH90 709 aa15.13■□□□□ 0.01
PTPRO-201ENST00000281171 C1orf232A0A0U1RR37 186 aa15.12■□□□□ 0.01
PTPRO-201ENST00000281171 USP4Q13107 963 aa15.12■□□□□ 0.01
PTPRO-201ENST00000281171 TRAPPC11Q7Z392 1133 aa15.12■□□□□ 0.01
PTPRO-201ENST00000281171 RBM12BQ8IXT5 1001 aaKnown RBP15.12■□□□□ 0.01
PTPRO-201ENST00000281171 GALNT15Q8N3T1 639 aa15.12■□□□□ 0.01
PTPRO-201ENST00000281171 LRRC53A6NM62 1247 aa15.12■□□□□ 0.01
PTPRO-201ENST00000281171 AKAP10O43572 662 aa15.12■□□□□ 0.01
PTPRO-201ENST00000281171 ADORA1P30542 326 aa15.12■□□□□ 0.01
PTPRO-201ENST00000281171 MAEAQ7L5Y9 396 aa15.12■□□□□ 0.01
PTPRO-201ENST00000281171 ZNF408Q9H9D4 720 aa15.12■□□□□ 0.01
PTPRO-201ENST00000281171 AIPL1Q9NZN9 384 aa15.12■□□□□ 0.01
PTPRO-201ENST00000281171 WASHC5Q12768 1159 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms