RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ICE2Q659A1 982 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 PADI6Q6TGC4 694 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 DAW1Q8N136 415 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 ARHGEF26Q96DR7 871 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 WRAP73Q9P2S5 460 aaPredicted RBP13.88□□□□□ -0.19
C9orf3-201ENST00000277198 IGSF9BQ9UPX0 1349 aa13.88□□□□□ -0.19
C9orf3-201ENST00000277198 C5orf60A6NFR6 353 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 PHF2O75151 1096 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 INHAP05111 366 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 ARP10275 920 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 FLT3P36888 993 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 GHRHRQ02643 423 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 CCL14Q16627 93 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 CNPY4Q8N129 248 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 SAMD3Q8N6K7 520 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 PRPF38AQ8NAV1 312 aaKnown RBP13.87□□□□□ -0.19
C9orf3-201ENST00000277198 P3H4Q92791 437 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 TLCD1Q96CP7 247 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 PGM2Q96G03 612 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 MOV10L1Q9BXT6 1211 aaKnown RBP13.87□□□□□ -0.19
C9orf3-201ENST00000277198 CELF4Q9BZC1 486 aaKnown RBP13.87□□□□□ -0.19
C9orf3-201ENST00000277198 WNT8AQ9H1J5 351 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 PABPC3Q9H361 631 aaKnown RBP13.87□□□□□ -0.19
C9orf3-201ENST00000277198 CENPHQ9H3R5 247 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 RABEP2Q9H5N1 569 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 UBE2TQ9NPD8 197 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-201ENST00000277198 COG5Q9UP83 839 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 A0A0G2JMZ2 1700 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 PARP14Q460N5 1801 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 CCDC169A6NNP5 214 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 K7ENM7 598 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 FTLP02792 175 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-201ENST00000277198 PLS3P13797 630 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 TAL1P17542 331 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-201ENST00000277198 CTNNA2P26232 953 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 HSD17B4P51659 736 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 IFFO1Q0D2I5 559 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 PRPF4BQ13523 1007 aaKnown RBP13.87□□□□□ -0.19
C9orf3-201ENST00000277198 TMEM132BQ14DG7 1078 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 PTPROQ16827 1216 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 ARHGAP44Q17R89 818 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 KRT71Q3SY84 523 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 TAX1BP1Q86VP1 789 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 JAMLQ86YT9 394 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 KSR1Q8IVT5 923 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 XXYLT1Q8NBI6 393 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 OR2W6PQ8NHA6 318 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 CYFIP2Q96F07 1278 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 UNC93B1Q9H1C4 597 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 IKZF4Q9H2S9 585 aa13.87□□□□□ -0.19
C9orf3-201ENST00000277198 MAP3K20Q9NYL2 800 aaKnown RBP13.87□□□□□ -0.19
C9orf3-201ENST00000277198 NOVA2Q9UNW9 492 aaKnown RBP13.87□□□□□ -0.19
C9orf3-201ENST00000277198 KIAA0391O15091 583 aaKnown RBP13.86□□□□□ -0.19
C9orf3-201ENST00000277198 CCL5P13501 91 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 MAPK4P31152 587 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 FNTAP49354 379 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 SEC24CP53992 1094 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 GTF2BQ00403 316 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 MLLT1Q03111 559 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-201ENST00000277198 IRF5Q13568 498 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 CYP1B1Q16678 543 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 MORN1Q5T089 497 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 CCDC174Q6PII3 467 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 MIER3Q7Z3K6 550 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 GTF3C2Q8WUA4 911 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-201ENST00000277198 TRIB2Q92519 343 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 ALG3Q92685 438 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 ZSWIM1Q9BR11 485 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 TMEM109Q9BVC6 243 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 SPATC1LQ9H0A9 340 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 DPH5Q9H2P9 285 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 ACTR5Q9H9F9 607 aaPredicted RBP13.86□□□□□ -0.19
C9orf3-201ENST00000277198 SEPT11Q9NVA2 429 aaKnown RBP13.86□□□□□ -0.19
C9orf3-201ENST00000277198 TAS2R14Q9NYV8 317 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 CTTNBP2NLQ9P2B4 639 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 NR2E1Q9Y466 385 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 EMSYQ7Z589 1322 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 RPTORQ8N122 1335 aa13.86□□□□□ -0.19
C9orf3-201ENST00000277198 PMS2P54278 862 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 ENPEPQ07075 957 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 PLEKHH3Q7Z736 793 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 FAM71AQ8IYT1 594 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 SLAIN1Q8ND83 568 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 USP6NLQ92738 828 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 PPANQ9NQ55 473 aaKnown RBP13.85□□□□□ -0.19
C9orf3-201ENST00000277198 HOXC10Q9NYD6 342 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 MTRF1LQ9UGC7 380 aaKnown RBP13.85□□□□□ -0.19
C9orf3-201ENST00000277198 MTUS1Q9ULD2 1270 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 ATP8A1Q9Y2Q0 1164 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 LOXHD1Q8IVV2 1947 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 VWA5AO00534 786 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 PTGIRP43119 386 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 PEX5P50542 639 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 MAGOHP61326 146 aaKnown RBP13.85□□□□□ -0.19
C9orf3-201ENST00000277198 SLMAPQ14BN4 828 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 SEL1L2Q5TEA6 688 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 PALB2Q86YC2 1186 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 MCF2L2Q86YR7 1114 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 REPS2Q8NFH8 660 aa13.85□□□□□ -0.19
C9orf3-201ENST00000277198 MAGOHBQ96A72 148 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms