RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 BZW2Q9Y6E2 419 aaKnown RBP15.26■□□□□ 0.03
SS18-201ENST00000269137 PLEKP08567 350 aaPredicted RBP15.25■□□□□ 0.03
SS18-201ENST00000269137 HOXA11P31270 313 aaPredicted RBP15.25■□□□□ 0.03
SS18-201ENST00000269137 EIF4A3P38919 411 aaKnown RBP15.25■□□□□ 0.03
SS18-201ENST00000269137 DRAP1Q14919 205 aaPredicted RBP15.25■□□□□ 0.03
SS18-201ENST00000269137 SNX17Q15036 470 aa15.25■□□□□ 0.03
SS18-201ENST00000269137 ENOX2Q16206 610 aaKnown RBP15.25■□□□□ 0.03
SS18-201ENST00000269137 ASTE1Q2TB18 679 aaPredicted RBP15.25■□□□□ 0.03
SS18-201ENST00000269137 LHX8Q68G74 356 aa15.25■□□□□ 0.03
SS18-201ENST00000269137 GDF6Q6KF10 455 aaPredicted RBP15.25■□□□□ 0.03
SS18-201ENST00000269137 APBB1IPQ7Z5R6 666 aaPredicted RBP15.25■□□□□ 0.03
SS18-201ENST00000269137 SERINC5Q86VE9 423 aa15.25■□□□□ 0.03
SS18-201ENST00000269137 CDR2LQ86X02 465 aaPredicted RBP15.25■□□□□ 0.03
SS18-201ENST00000269137 THNSL1Q8IYQ7 743 aa15.25■□□□□ 0.03
SS18-201ENST00000269137 CPB2Q96IY4 423 aa15.25■□□□□ 0.03
SS18-201ENST00000269137 TSEN34Q9BSV6 310 aaKnown RBP15.25■□□□□ 0.03
SS18-201ENST00000269137 GINS2Q9Y248 185 aa15.25■□□□□ 0.03
SS18-201ENST00000269137 GRIN2DO15399 1336 aa15.25■□□□□ 0.03
SS18-201ENST00000269137 PTPRJQ12913 1337 aa15.25■□□□□ 0.03
SS18-201ENST00000269137 F8VZ95 297 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 KIF2AO00139 706 aaPredicted RBP15.24■□□□□ 0.03
SS18-201ENST00000269137 B4GALT4O60513 344 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 LRRN2O75325 713 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 IL18RAPO95256 599 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 LCA5LO95447 670 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 TUBB4AP04350 444 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 FERP16591 822 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 ANXA13P27216 316 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 AXLP30530 894 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 SOX5P35711 763 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 KRT83P78385 493 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 PTPN14Q15678 1187 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 DCAF4L1Q3SXM0 396 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 TDRD10Q5VZ19 366 aaKnown RBP15.24■□□□□ 0.03
SS18-201ENST00000269137 CATSPER4Q7RTX7 472 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 RSPH3Q86UC2 560 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 ACRBPQ8NEB7 543 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 FAM81BQ96LP2 452 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 ADPGKQ9BRR6 497 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 GPR88Q9GZN0 384 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 RPF1Q9H9Y2 349 aaKnown RBP15.24■□□□□ 0.03
SS18-201ENST00000269137 UBE2TQ9NPD8 197 aaPredicted RBP15.24■□□□□ 0.03
SS18-201ENST00000269137 REXO2Q9Y3B8 237 aaKnown RBP15.24■□□□□ 0.03
SS18-201ENST00000269137 TRIM17Q9Y577 477 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 PTCH2Q9Y6C5 1203 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 MOXD2PA6NHM9 499 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 IPO7O95373 1038 aaKnown RBP15.24■□□□□ 0.03
SS18-201ENST00000269137 STAG3L1P0CL83 205 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 ACLYP53396 1101 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 PTPN11Q06124 597 aaPredicted RBP15.24■□□□□ 0.03
SS18-201ENST00000269137 KLHL30Q0D2K2 578 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 DUOXA2Q1HG44 320 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 LMBRD2Q68DH5 695 aaPredicted RBP15.24■□□□□ 0.03
SS18-201ENST00000269137 ARHGEF19Q8IW93 802 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 CEP120Q8N960 986 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 C16orf45Q96MC5 204 aaPredicted RBP15.24■□□□□ 0.03
SS18-201ENST00000269137 NT5C1BQ96P26 610 aa15.24■□□□□ 0.03
SS18-201ENST00000269137 CELF4Q9BZC1 486 aaKnown RBP15.24■□□□□ 0.03
SS18-201ENST00000269137 ANK1P16157 1881 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 TULP1O00294 542 aaPredicted RBP15.23■□□□□ 0.03
SS18-201ENST00000269137 HLA-DRAP01903 254 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
SS18-201ENST00000269137 CCDC172P0C7W6 258 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 FGFR4P22455 802 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 KIF11P52732 1056 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 MRPS6P82932 125 aaKnown RBP15.23■□□□□ 0.03
SS18-201ENST00000269137 TDRD12Q587J7 1177 aaKnown RBP15.23■□□□□ 0.03
SS18-201ENST00000269137 FAM47CQ5HY64 1035 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 NOTUMQ6P988 496 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 ZNF662Q6ZS27 426 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 ENOSF1Q7L5Y1 443 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 OR5B17Q8NGF7 314 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 HELQQ8TDG4 1101 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 DEF6Q9H4E7 631 aa15.23■□□□□ 0.03
SS18-201ENST00000269137 RBAK-RBAKDNI3L0D1 243 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 AKR1B10O60218 316 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 VNN1O95497 513 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 GRM5P41594 1212 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 MFAP3P55082 362 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 GCNT1Q02742 428 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 ARID5AQ03989 594 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 BIRC3Q13489 604 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 SPA17Q15506 151 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 SLC27A1Q6PCB7 646 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 TMEM192Q8IY95 271 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 TMEM40Q8WWA1 233 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 ASB7Q9H672 318 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 M0QZ92 97 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 FOXN3O00409 490 aaPredicted RBP15.22■□□□□ 0.03
SS18-201ENST00000269137 ZNF263O14978 683 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 EVI5O60447 810 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 CXCL8P10145 99 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 TNNT1P13805 278 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 HSPA6P17066 643 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 PIK3CAP42336 1068 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 OSTNP61366 133 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 ITGA7Q13683 1181 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 ARHGAP44Q17R89 818 aa15.22■□□□□ 0.03
SS18-201ENST00000269137 WDR44Q5JSH3 913 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms