RNA–Protein interactions for RNA: ENST00000265379.10

COL6A5-201, Transcript of collagen type VI alpha 5 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A5, Length 9,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-201ENST00000265379 GPC2Q8N158 579 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 FAM193BQ96PV7 902 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 MRPL40Q9NQ50 206 aaKnown RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 RRN3Q9NYV6 651 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 MBD2Q9UBB5 411 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 MAPK8IP1Q9UQF2 711 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 PIGHQ14442 188 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 MFSD14CQ5VZR4 134 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 CAPS2Q9BXY5 557 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 PARVAQ9NVD7 372 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 hCG_1642624A0A1W2PR95 340 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 TMEM191CA6NGB0 347 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 POTEMA6NI47 508 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 GOLGA8MH3BSY2 632 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 IFNB1P01574 187 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 VIL1P09327 827 aaKnown RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 AXLP30530 894 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 CASP2P42575 452 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 SH3RF1Q7Z6J0 888 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 TXNRD3Q86VQ6 643 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 CDKL3Q8IVW4 592 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 LRRC8CQ8TDW0 803 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 KLC2Q9H0B6 622 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 TXLNGQ9NUQ3 528 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 TRAPPC3O43617 180 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 RAD17O75943 681 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 SUN1O94901 812 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 GCNT1Q02742 428 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 P3H1Q32P28 736 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 ZPBP2Q6X784 338 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 OXER1Q8TDS5 423 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 SEPT1Q8WYJ6 367 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 TADA3O75528 432 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 KRT38O76015 456 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 ATP5BP06576 529 aaKnown RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 DNAJB2P25686 324 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 OAS2P29728 719 aaKnown RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 HNRNPH3P31942 346 aaKnown RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 MAEAQ7L5Y9 396 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 C12orf56Q8IXR9 622 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 VTA1Q9NP79 307 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 CYP4A11Q02928 519 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 SGO2Q562F6 1265 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 TATDN1Q6P1N9 297 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 SPDYE1Q8NFV5 336 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 SPATA20Q8TB22 786 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 PPWD1Q96BP3 646 aaKnown RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 CEP19Q96LK0 163 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 BRD8Q9H0E9 1235 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 ADARB2Q9NS39 739 aaKnown RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 STK39Q9UEW8 545 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 COL16A1Q07092 1604 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 IQANK1A0A1B0GTG1 560 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 LRRC53A6NM62 1247 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 ABL1P00519 1130 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 GH1P01241 217 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 NR3C2P08235 984 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 TM4SF1P30408 202 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 RAB27AP51159 221 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 CYFIP1Q7L576 1253 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 FLCNQ8NFG4 579 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 LZICQ8WZA0 190 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 DNAJC12Q9UKB3 198 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 RWDD3Q9Y3V2 267 aa8.72□□□□□ -1.01
COL6A5-201ENST00000265379 ARIH1Q9Y4X5 557 aaPredicted RBP8.72□□□□□ -1.01
COL6A5-201ENST00000265379 PRPSAP2O60256 369 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 RASSF7Q02833 373 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 PARD3BQ8TEW8 1205 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 TBCBQ99426 244 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 ST6GALNAC4Q9H4F1 302 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 SNX12Q9UMY4 172 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 DYTNA2CJ06 578 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 IGF2BP3O00425 579 aaKnown RBP eCLIP8.71□□□□□ -1.01
COL6A5-201ENST00000265379 GSTA4O15217 222 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 C21orf2O43822 256 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 ARL4CP56559 192 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 ZNF699Q32M78 642 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 ACAP1Q15027 740 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 C16orf87Q6PH81 154 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 RAPH1Q70E73 1250 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 ZDHHC17Q8IUH5 632 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 DDX50Q9BQ39 737 aaKnown RBP8.71□□□□□ -1.01
COL6A5-201ENST00000265379 MAGEB5Q9BZ81 275 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 ROPN1BQ9BZX4 212 aaPredicted RBP8.71□□□□□ -1.01
COL6A5-201ENST00000265379 POLR3FQ9H1D9 316 aaPredicted RBP8.71□□□□□ -1.01
COL6A5-201ENST00000265379 TUBB1Q9H4B7 451 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 RPAP3Q9H6T3 665 aaPredicted RBP8.71□□□□□ -1.01
COL6A5-201ENST00000265379 ROPN1Q9HAT0 212 aaPredicted RBP8.71□□□□□ -1.01
COL6A5-201ENST00000265379 CAPN7Q9Y6W3 813 aa8.71□□□□□ -1.01
COL6A5-201ENST00000265379 PPP1R3GB7ZBB8 358 aa8.71□□□□□ -1.02
COL6A5-201ENST00000265379 NVLO15381 856 aaKnown RBP8.71□□□□□ -1.02
COL6A5-201ENST00000265379 MARSP56192 900 aaKnown RBP8.71□□□□□ -1.02
COL6A5-201ENST00000265379 CCZ1BP86790 482 aa8.71□□□□□ -1.02
COL6A5-201ENST00000265379 CCZ1P86791 482 aaPredicted RBP8.71□□□□□ -1.02
COL6A5-201ENST00000265379 EHHADHQ08426 723 aa8.71□□□□□ -1.02
COL6A5-201ENST00000265379 DYNC1I2Q13409 638 aaKnown RBP8.71□□□□□ -1.02
COL6A5-201ENST00000265379 TSTA3Q13630 321 aaPredicted RBP8.71□□□□□ -1.02
COL6A5-201ENST00000265379 PPP6R3Q5H9R7 873 aaPredicted RBP8.71□□□□□ -1.02
COL6A5-201ENST00000265379 SCYL2Q6P3W7 929 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms