RNA–Protein interactions for RNA: ENST00000265081.6

MSH3-201, Transcript of mutS homolog 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-201ENST00000265081 TOPORSQ9NS56 1045 aaPredicted RBP11.99□□□□□ -0.49
MSH3-201ENST00000265081 AMACRQ9UHK6 382 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 PTPRJQ12913 1337 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 A0A0B4J269 797 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 IGKV6-21A0A0C4DH24 114 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 GSTTP1A0A1W2PQM5 241 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 GOLGA8IPA6NC78 632 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 GOLGA8JA6NMD2 632 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 PHACTR2O75167 634 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 LGR5O75473 907 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 GBP1P32455 592 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 SOX10P56693 466 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 MON1BQ7L1V2 547 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 ASAP3Q8TDY4 903 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 KRT35Q92764 455 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 POP1Q99575 1024 aaKnown RBP11.99□□□□□ -0.49
MSH3-201ENST00000265081 LRRC19Q9H756 370 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 ZNF236Q9UL36 1845 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 TP73O15350 636 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 PAEPP09466 180 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 FLT3P36888 993 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 ZNF844Q08AG5 666 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 STXBP2Q15833 593 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 TDRD10Q5VZ19 366 aaKnown RBP11.99□□□□□ -0.49
MSH3-201ENST00000265081 RAB17Q9H0T7 212 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 MROH7Q68CQ1 1323 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 PLXNB2O15031 1838 aa11.99□□□□□ -0.49
MSH3-201ENST00000265081 A0A0G2JLL6 359 aaPredicted RBP11.98□□□□□ -0.49
MSH3-201ENST00000265081 SOCS7O14512 581 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 ZBTB7AO95365 584 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 ABCB4P21439 1286 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 COMTP21964 271 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 CFAP58Q5T655 872 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 PRRT2Q7Z6L0 340 aaPredicted RBP11.98□□□□□ -0.49
MSH3-201ENST00000265081 UBL4BQ8N7F7 174 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 GOLGA6L1Q8N7Z2 621 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 PROCA1Q8NCQ7 364 aaPredicted RBP11.98□□□□□ -0.49
MSH3-201ENST00000265081 HINFPQ9BQA5 517 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 TMEM109Q9BVC6 243 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 FBXO40Q9UH90 709 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 LOC102724159A0A0B4J2E5 919 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 FSCN2O14926 492 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 FNTAP49354 379 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 PDE6CP51160 858 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 FSTL1Q12841 308 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 MOGSQ13724 837 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 PWP2Q15269 919 aaKnown RBP11.98□□□□□ -0.49
MSH3-201ENST00000265081 ZNF564Q8TBZ8 553 aaPredicted RBP11.98□□□□□ -0.49
MSH3-201ENST00000265081 TATDN2Q93075 761 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 PLAAQ9Y263 795 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 CTDP1Q9Y5B0 961 aaPredicted RBP11.98□□□□□ -0.49
MSH3-201ENST00000265081 CCDC169A6NNP5 214 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 ZBTB42B2RXF5 422 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 MAFO75444 373 aaPredicted RBP11.98□□□□□ -0.49
MSH3-201ENST00000265081 KRT14P02533 472 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 TGFB3P10600 412 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 PROZP22891 400 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 MARCKSL1P49006 195 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 BIRC3Q13489 604 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 TTC27Q6P3X3 843 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 LEKR1Q6ZMV7 388 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 IFT81Q8WYA0 676 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 TLCD1Q96CP7 247 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 VCPIP1Q96JH7 1222 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 CGRRF1Q99675 332 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 ZNF302Q9NR11 478 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 TMOD4Q9NZQ9 345 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 BTBD7Q9P203 1132 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 SEPT9Q9UHD8 586 aaPredicted RBP11.98□□□□□ -0.49
MSH3-201ENST00000265081 NEU2Q9Y3R4 380 aa11.98□□□□□ -0.49
MSH3-201ENST00000265081 SOWAHBA6NEL2 793 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 TMCO5BA8MYB1 307 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 DR1Q01658 176 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 SLFN12LQ6IEE8 588 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 MCOLN2Q8IZK6 566 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 POMGNT1Q8WZA1 660 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 NUP85Q9BW27 656 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 CAPS2Q9BXY5 557 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 CWC15Q9P013 229 aaKnown RBP11.97□□□□□ -0.49
MSH3-201ENST00000265081 SLC12A6Q9UHW9 1150 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 TCRBV5S1A1TA0A578 114 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 MYO1FO00160 1098 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 DAPK3O43293 454 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 LDHAP00338 332 aaKnown RBP11.97□□□□□ -0.49
MSH3-201ENST00000265081 UBA1P22314 1058 aaKnown RBP11.97□□□□□ -0.49
MSH3-201ENST00000265081 TREML2Q5T2D2 321 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 ZPBP2Q6X784 338 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 JAMLQ86YT9 394 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 TRIM11Q96F44 468 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 IFT74Q96LB3 600 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 GGA3Q9NZ52 723 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 UTP11Q9Y3A2 253 aaKnown RBP11.97□□□□□ -0.49
MSH3-201ENST00000265081 PCDHB2Q9Y5E7 798 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 UMODL1Q5DID0 1318 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 DNAJC25-GNG10A0A024R161 153 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 MAN1A1P33908 653 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 NLRP11P59045 1033 aaKnown RBP11.97□□□□□ -0.49
MSH3-201ENST00000265081 PPP1R2P3Q6NXS1 205 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 FOXR1Q6PIV2 292 aa11.97□□□□□ -0.49
MSH3-201ENST00000265081 SRLQ86TD4 932 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms