RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 GRK7Q8WTQ7 553 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 ZBTB10Q96DT7 871 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 RBAKQ9NYW8 714 aaPredicted RBP17.41■□□□□ 0.38
CTCF-201ENST00000264010 ZNF536O15090 1300 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 RPTORQ8N122 1335 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 MYH7BA7E2Y1 1941 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 THAP12O43422 761 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 SETSIPP0DME0 302 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 ZNF280AP59817 542 aaPredicted RBP17.41■□□□□ 0.38
CTCF-201ENST00000264010 YWHAEP62258 255 aaKnown RBP17.41■□□□□ 0.38
CTCF-201ENST00000264010 UGCGQ16739 394 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 SNX24Q9Y343 169 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 SUPT20HL2P0C7V6 817 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 MAPK7Q13164 816 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 SGO2Q562F6 1265 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 DAW1Q8N136 415 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 PTPN22Q9Y2R2 807 aa17.41■□□□□ 0.38
CTCF-201ENST00000264010 SLX4Q8IY92 1834 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 ZSCAN5CA6NGD5 496 aaPredicted RBP17.4■□□□□ 0.38
CTCF-201ENST00000264010 CLDN3O15551 220 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 EXTL3O43909 919 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 ECEL1O95672 775 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 TMEM191BP0C7N4 346 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 MAN1A1P33908 653 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 SEPT7Q16181 437 aaKnown RBP17.4■□□□□ 0.38
CTCF-201ENST00000264010 LMBRD2Q68DH5 695 aaPredicted RBP17.4■□□□□ 0.38
CTCF-201ENST00000264010 DDX42Q86XP3 938 aaKnown RBP eCLIP17.4■□□□□ 0.38
CTCF-201ENST00000264010 PROCA1Q8NCQ7 364 aaPredicted RBP17.4■□□□□ 0.38
CTCF-201ENST00000264010 TNNC2P02585 160 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 CD19P15391 556 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 COMTP21964 271 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 PAX7P23759 505 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 EIF3BP55884 814 aaKnown RBP17.4■□□□□ 0.38
CTCF-201ENST00000264010 PLCB3Q01970 1234 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 CYP24A1Q07973 514 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 PARD3BQ8TEW8 1205 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 DONSONQ9NYP3 566 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 ANKRD63C9JTQ0 380 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 NCANO14594 1321 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 HNRNPH1P31943 449 aaKnown RBP17.4■□□□□ 0.38
CTCF-201ENST00000264010 NCKAP1LP55160 1127 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 TFDP1Q14186 410 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 ZKSCAN8Q15776 578 aaPredicted RBP17.4■□□□□ 0.38
CTCF-201ENST00000264010 PHLDB2Q86SQ0 1253 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 TMEM161BQ8NDZ6 487 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 TAS1R2Q8TE23 839 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 POP1Q99575 1024 aaKnown RBP17.4■□□□□ 0.38
CTCF-201ENST00000264010 ST6GALNAC4Q9H4F1 302 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 ZMYM2Q9UBW7 1377 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 GTF3C4Q9UKN8 822 aa17.4■□□□□ 0.38
CTCF-201ENST00000264010 hCG_2014768A0A024R1R8 64 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 PHF20L1A8MW92 1017 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 OATP04181 439 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 ACOT2P49753 483 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 STAT5BP51692 787 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 SOX10P56693 466 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 CDR2Q01850 454 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 MYO1EQ12965 1108 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 LLGL1Q15334 1064 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 ZBTB33Q86T24 672 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 RGS16O15492 202 aaPredicted RBP17.39■□□□□ 0.37
CTCF-201ENST00000264010 DHX15O43143 795 aaKnown RBP17.39■□□□□ 0.37
CTCF-201ENST00000264010 CCNE2O96020 404 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 SRGAP2CP0DJJ0 459 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 POTEAQ6S8J7 498 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 ARHGEF26Q96DR7 871 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 ATP6V1G3Q96LB4 118 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 RPS6KC1Q96S38 1066 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 KRT14P02533 472 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 KRT19P08727 400 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 TBXAS1P24557 533 aaPredicted RBP17.39■□□□□ 0.37
CTCF-201ENST00000264010 SURF1Q15526 300 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 SV2AQ7L0J3 742 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 SLC30A5Q8TAD4 765 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 UBXN6Q9BZV1 441 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 A1CFQ9NQ94 594 aaKnown RBP17.39■□□□□ 0.37
CTCF-201ENST00000264010 ADAM22Q9P0K1 906 aa17.39■□□□□ 0.37
CTCF-201ENST00000264010 AJAP1Q9UKB5 411 aaPredicted RBP17.39■□□□□ 0.37
CTCF-201ENST00000264010 SYF2O95926 243 aaKnown RBP17.38■□□□□ 0.37
CTCF-201ENST00000264010 CYP11B1P15538 503 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 SESN3P58005 492 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 DBN1Q16643 649 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 TMEM270Q6UE05 265 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 LRIG3Q6UXM1 1119 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 TRIM72Q6ZMU5 477 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 PPP2R3BQ9Y5P8 575 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 TULP2O00295 520 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 ZC3H11AO75152 810 aaKnown RBP eCLIP17.38■□□□□ 0.37
CTCF-201ENST00000264010 HLA-DRAP01903 254 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 SLC20A2Q08357 652 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 C11orf63Q6NUN7 778 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 TRIM51Q9BSJ1 452 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 PI4K2AQ9BTU6 479 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 CELF4Q9BZC1 486 aaKnown RBP17.38■□□□□ 0.37
CTCF-201ENST00000264010 TOPORSQ9NS56 1045 aaPredicted RBP17.38■□□□□ 0.37
CTCF-201ENST00000264010 PCDHB2Q9Y5E7 798 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 ATMINO43313 823 aaPredicted RBP17.38■□□□□ 0.37
CTCF-201ENST00000264010 ADRB2P07550 413 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 MMEP08473 750 aa17.38■□□□□ 0.37
CTCF-201ENST00000264010 ITGA4P13612 1032 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms