RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 CETN1Q12798 172 aa24.57■■□□□ 1.52
UFD1-201ENST00000263202 SURF1Q15526 300 aa24.57■■□□□ 1.52
UFD1-201ENST00000263202 TRIM65Q6PJ69 517 aa24.57■■□□□ 1.52
UFD1-201ENST00000263202 C15orf39Q6ZRI6 1047 aa24.57■■□□□ 1.52
UFD1-201ENST00000263202 AGO3Q9H9G7 860 aaKnown RBP24.57■■□□□ 1.52
UFD1-201ENST00000263202 COQ4Q9Y3A0 265 aa24.57■■□□□ 1.52
UFD1-201ENST00000263202 MEFVO15553 781 aaPredicted RBP24.56■■□□□ 1.52
UFD1-201ENST00000263202 KRT9P35527 623 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 UBXN11Q5T124 520 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 TRAF7Q6Q0C0 670 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 EHBP1Q8NDI1 1231 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 FAM212AQ96EL1 285 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 CCDC51Q96ER9 411 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 FAM84AQ96KN4 292 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 PANX2Q96RD6 677 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 EDEM3Q9BZQ6 932 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 INTS2Q9H0H0 1204 aaKnown RBP24.56■■□□□ 1.52
UFD1-201ENST00000263202 TRIP11Q15643 1979 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 C4BPAP04003 597 aaKnown RBP24.56■■□□□ 1.52
UFD1-201ENST00000263202 ZBED6P86452 979 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 LPIN1Q14693 890 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 KLHDC7AQ5VTJ3 777 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 SLC39A5Q6ZMH5 540 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 WDR49Q8IV35 697 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 ERVK-5Q9HDB9 667 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 ABHD10Q9NUJ1 306 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 CEP72Q9P209 647 aa24.56■■□□□ 1.52
UFD1-201ENST00000263202 MROH7Q68CQ1 1323 aa24.55■■□□□ 1.52
UFD1-201ENST00000263202 GPR182O15218 404 aa24.55■■□□□ 1.52
UFD1-201ENST00000263202 IL18RAPO95256 599 aa24.55■■□□□ 1.52
UFD1-201ENST00000263202 GHRP10912 638 aa24.55■■□□□ 1.52
UFD1-201ENST00000263202 COL6A1P12109 1028 aa24.55■■□□□ 1.52
UFD1-201ENST00000263202 CCZ1BP86790 482 aa24.55■■□□□ 1.52
UFD1-201ENST00000263202 CCZ1P86791 482 aaPredicted RBP24.55■■□□□ 1.52
UFD1-201ENST00000263202 NFX1Q12986 1120 aaKnown RBP24.55■■□□□ 1.52
UFD1-201ENST00000263202 SLC10A6Q3KNW5 377 aa24.55■■□□□ 1.52
UFD1-201ENST00000263202 ZACNQ401N2 412 aa24.55■■□□□ 1.52
UFD1-201ENST00000263202 ACAP3Q96P50 834 aa24.55■■□□□ 1.52
UFD1-201ENST00000263202 TMX1Q9H3N1 280 aa24.55■■□□□ 1.52
UFD1-201ENST00000263202 SQORQ9Y6N5 450 aa24.55■■□□□ 1.52
UFD1-201ENST00000263202 POLR2FP61218 127 aaKnown RBP24.54■■□□□ 1.52
UFD1-201ENST00000263202 ANKLE1Q8NAG6 615 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 FBXL13Q8NEE6 735 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 OR5B17Q8NGF7 314 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 CAGE1Q8TC20 777 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 DIS3LQ8TF46 1054 aaKnown RBP24.54■■□□□ 1.52
UFD1-201ENST00000263202 BAP1Q92560 729 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 CCDC94Q9BW85 323 aaPredicted RBP24.54■■□□□ 1.52
UFD1-201ENST00000263202 TRIM6Q9C030 488 aaPredicted RBP24.54■■□□□ 1.52
UFD1-201ENST00000263202 CHST12Q9NRB3 414 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 PADI3Q9ULW8 664 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 LACTBL1A8MY62 500 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 LRRN2O75325 713 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 UCHL3P15374 230 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 CD52P31358 61 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 ATN1P54259 1190 aaPredicted RBP24.54■■□□□ 1.52
UFD1-201ENST00000263202 TDRD10Q5VZ19 366 aaKnown RBP24.54■■□□□ 1.52
UFD1-201ENST00000263202 CACNA2D4Q7Z3S7 1137 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 TMEM139Q8IV31 216 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 USP38Q8NB14 1042 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 ZNF397Q8NF99 534 aaPredicted RBP24.54■■□□□ 1.52
UFD1-201ENST00000263202 OR8K1Q8NGG5 319 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 TAS1R2Q8TE23 839 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 SEMA4DQ92854 862 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 DNAJC7Q99615 494 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 NLRC4Q9NPP4 1024 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 SNTG2Q9NY99 539 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 FBXL5Q9UKA1 691 aa24.54■■□□□ 1.52
UFD1-201ENST00000263202 PDCD11Q14690 1871 aaKnown RBP24.53■■□□□ 1.52
UFD1-201ENST00000263202 AP3M2P53677 418 aa24.53■■□□□ 1.52
UFD1-201ENST00000263202 TWF2Q6IBS0 349 aaKnown RBP24.53■■□□□ 1.52
UFD1-201ENST00000263202 EFCAB13Q8IY85 973 aa24.53■■□□□ 1.52
UFD1-201ENST00000263202 NXF3Q9H4D5 531 aaKnown RBP24.53■■□□□ 1.52
UFD1-201ENST00000263202 RAB20Q9NX57 234 aa24.53■■□□□ 1.52
UFD1-201ENST00000263202 HES2Q9Y543 173 aa24.53■■□□□ 1.52
UFD1-201ENST00000263202 PQBP1O60828 265 aaKnown RBP24.52■■□□□ 1.52
UFD1-201ENST00000263202 PAK2Q13177 524 aa24.52■■□□□ 1.52
UFD1-201ENST00000263202 ANKRD33Q7Z3H0 272 aa24.52■■□□□ 1.52
UFD1-201ENST00000263202 ASB7Q9H672 318 aa24.52■■□□□ 1.52
UFD1-201ENST00000263202 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.52■■□□□ 1.52
UFD1-201ENST00000263202 FHOD1Q9Y613 1164 aa24.52■■□□□ 1.52
UFD1-201ENST00000263202 TLR3O15455 904 aaKnown RBP24.51■■□□□ 1.51
UFD1-201ENST00000263202 MBTPS1Q14703 1052 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 GJB7Q6PEY0 223 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 CCDC112Q8NEF3 446 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 BAG1Q99933 345 aaPredicted RBP24.51■■□□□ 1.51
UFD1-201ENST00000263202 NAA15Q9BXJ9 866 aaKnown RBP24.51■■□□□ 1.51
UFD1-201ENST00000263202 APEX2Q9UBZ4 518 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 AJAP1Q9UKB5 411 aaPredicted RBP24.51■■□□□ 1.51
UFD1-201ENST00000263202 ZKSCAN5Q9Y2L8 839 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 VNN1O95497 513 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 SKILP12757 684 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 FECHP22830 423 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 BIRC3Q13489 604 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 BFSP2Q13515 415 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 DUOXA2Q1HG44 320 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 C1orf53Q5VUE5 145 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 PHLDB3Q6NSJ2 640 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 RRAGAQ7L523 313 aa24.51■■□□□ 1.51
UFD1-201ENST00000263202 MTMR12Q9C0I1 747 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms