RNA–Protein interactions for RNA: ENST00000263121.11

SMARCB1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,690 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-201ENST00000263121 PLEKP08567 350 aaPredicted RBP24.76■■□□□ 1.55
SMARCB1-201ENST00000263121 TDRD10Q5VZ19 366 aaKnown RBP24.76■■□□□ 1.55
SMARCB1-201ENST00000263121 CATSPER4Q7RTX7 472 aa24.76■■□□□ 1.55
SMARCB1-201ENST00000263121 RPAINQ86UA6 219 aa24.76■■□□□ 1.55
SMARCB1-201ENST00000263121 WDR49Q8IV35 697 aa24.76■■□□□ 1.55
SMARCB1-201ENST00000263121 REXO1L1PQ8IX06 675 aa24.76■■□□□ 1.55
SMARCB1-201ENST00000263121 FAM84AQ96KN4 292 aa24.76■■□□□ 1.55
SMARCB1-201ENST00000263121 WBP1LQ9NX94 342 aa24.76■■□□□ 1.55
SMARCB1-201ENST00000263121 SERPING1P05155 500 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 CLTAP09496 248 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 CCDC175P0C221 793 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 AP3M2P53677 418 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 MAPK8IP2Q13387 824 aaPredicted RBP24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 ASIC2Q16515 512 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 KYAT1Q16773 422 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 ARHGEF19Q8IW93 802 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 PTPN22Q9Y2R2 807 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 ANK1P16157 1881 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 F8VZ95 297 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 RPLP2P05387 115 aaKnown RBP24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 CYLC1P35663 651 aaPredicted RBP24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 MRPS6P82932 125 aaKnown RBP24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 SLC9C1Q4G0N8 1177 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 TMEM192Q8IY95 271 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 OR5B17Q8NGF7 314 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 SH3TC2Q8TF17 1288 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 WNT8BQ93098 351 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 ADPGKQ9BRR6 497 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 CELF4Q9BZC1 486 aaKnown RBP24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 GPR88Q9GZN0 384 aa24.75■■□□□ 1.55
SMARCB1-201ENST00000263121 SSU72P8A0A1W2PR75 194 aa24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 STAG3L1P0CL83 205 aa24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 AXLP30530 894 aa24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 OSTNP61366 133 aa24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 PTPN11Q06124 597 aaPredicted RBP24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 NCBP1Q09161 790 aaKnown RBP24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 ITGA7Q13683 1181 aa24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 DRAP1Q14919 205 aaPredicted RBP24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 DCAF4L1Q3SXM0 396 aa24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 IRF2BP2Q7Z5L9 587 aa24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 RSPH3Q86UC2 560 aa24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 GPIHBP1Q8IV16 184 aa24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 ACRBPQ8NEB7 543 aa24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 RPF1Q9H9Y2 349 aaKnown RBP24.74■■□□□ 1.55
SMARCB1-201ENST00000263121 EIF3CLB5ME19 914 aaKnown RBP24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 B4GALT4O60513 344 aa24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 ZC3H11AO75152 810 aaKnown RBP eCLIP24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 IL18RAPO95256 599 aa24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 VNN1O95497 513 aa24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 EIF4A3P38919 411 aaKnown RBP24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 STAT1P42224 750 aa24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 ASTE1Q2TB18 679 aaPredicted RBP24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 NOTUMQ6P988 496 aa24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 NYAP1Q6ZVC0 841 aa24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 VTI1AQ96AJ9 217 aa24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 CCDC42Q96M95 316 aa24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 EIF3CQ99613 913 aaKnown RBP24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 UBE2TQ9NPD8 197 aaPredicted RBP24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 REXO2Q9Y3B8 237 aaKnown RBP24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 TRPV2Q9Y5S1 764 aa24.73■■□□□ 1.55
SMARCB1-201ENST00000263121 MEFVO15553 781 aaPredicted RBP24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 HLA-DRAP01903 254 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 CXCL8P10145 99 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 SOX5P35711 763 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 PRKCIP41743 596 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 SLC27A1Q6PCB7 646 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 NT5C1BQ96P26 610 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 CDY2AQ9Y6F7 541 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 GRM5P41594 1212 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 BIRC3Q13489 604 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 PTGISQ16647 500 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 APBB1IPQ7Z5R6 666 aaPredicted RBP24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 HELQQ8TDG4 1101 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 FAM212AQ96EL1 285 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 GLT1D1Q96MS3 346 aa24.72■■□□□ 1.55
SMARCB1-201ENST00000263121 GOLGA6L9A6NEM1 432 aa24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 M0QZ92 97 aa24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 LCA5LO95447 670 aa24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 FERP16591 822 aa24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 PIK3CAP42336 1068 aa24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 KIF11P52732 1056 aa24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 ARID5AQ03989 594 aa24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 KLHL30Q0D2K2 578 aa24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 TDRD12Q587J7 1177 aaKnown RBP24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 FMNL3Q8IVF7 1028 aa24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 EFCAB13Q8IY85 973 aa24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 ARRDC4Q8NCT1 418 aa24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 C16orf45Q96MC5 204 aaPredicted RBP24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 BZW2Q9Y6E2 419 aaKnown RBP24.71■■□□□ 1.55
SMARCB1-201ENST00000263121 NPTXRO95502 500 aa24.7■■□□□ 1.54
SMARCB1-201ENST00000263121 PNMA6AP0CW24 399 aaPredicted RBP24.7■■□□□ 1.54
SMARCB1-201ENST00000263121 MGAT3Q09327 533 aa24.7■■□□□ 1.54
SMARCB1-201ENST00000263121 ARHGAP44Q17R89 818 aa24.7■■□□□ 1.54
SMARCB1-201ENST00000263121 DUOXA2Q1HG44 320 aa24.7■■□□□ 1.54
SMARCB1-201ENST00000263121 KREMEN1Q96MU8 473 aa24.7■■□□□ 1.54
SMARCB1-201ENST00000263121 MTMR12Q9C0I1 747 aa24.7■■□□□ 1.54
SMARCB1-201ENST00000263121 SENP6Q9GZR1 1112 aaPredicted RBP24.7■■□□□ 1.54
SMARCB1-201ENST00000263121 UNC93B1Q9H1C4 597 aa24.7■■□□□ 1.54
SMARCB1-201ENST00000263121 A0A1W2PQ45 241 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms