RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 IRF2BPLQ9H1B7 796 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 MED4Q9NPJ6 270 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 LUC7LQ9NQ29 371 aaKnown RBP10.48□□□□□ -0.73
TTC39A-201ENST00000262675 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.48□□□□□ -0.73
TTC39A-201ENST00000262675 PADI3Q9ULW8 664 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 JRKLQ9Y4A0 524 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 MRPL42Q9Y6G3 142 aaKnown RBP10.48□□□□□ -0.73
TTC39A-201ENST00000262675 SSU72P8A0A1W2PR75 194 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 MYMKA6NI61 221 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 HBP1O60381 514 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 TACC1O75410 805 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 USP11P51784 963 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 FKBP3Q00688 224 aaKnown RBP10.48□□□□□ -0.73
TTC39A-201ENST00000262675 KRT76Q01546 638 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 ZNF484Q5JVG2 852 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 SPPL3Q8TCT6 385 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 SNX29Q8TEQ0 813 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 SECISBP2LQ93073 1101 aaKnown RBP10.48□□□□□ -0.73
TTC39A-201ENST00000262675 MSLNLQ96KJ4 702 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 FAM49AQ9H0Q0 323 aaPredicted RBP10.48□□□□□ -0.73
TTC39A-201ENST00000262675 KCNH7Q9NS40 1196 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 PCDHB7Q9Y5E2 793 aa10.48□□□□□ -0.73
TTC39A-201ENST00000262675 A0A0U1RQJ8 604 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 CARNS1A5YM72 827 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 GPR182O15218 404 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 HOXA2O43364 376 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 ATG7O95352 703 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 ITGB1P05556 798 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 ATF7P17544 494 aaPredicted RBP10.47□□□□□ -0.73
TTC39A-201ENST00000262675 ACTR2P61160 394 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 IGBP1P78318 339 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 PLCB4Q15147 1175 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 CEP55Q53EZ4 464 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 PPP4R3CPQ6ZMV5 832 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 ALYREFQ86V81 257 aaKnown RBP10.47□□□□□ -0.73
TTC39A-201ENST00000262675 RNF135Q8IUD6 432 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 SMRP1Q8NCR6 262 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 ATRIPQ8WXE1 791 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 EPC1Q9H2F5 836 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 IGFLR1Q9H665 355 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 AGO3Q9H9G7 860 aaKnown RBP10.47□□□□□ -0.73
TTC39A-201ENST00000262675 AGPAT5Q9NUQ2 364 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 LZTS1Q9Y250 596 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 SIK3Q9Y2K2 1263 aa10.47□□□□□ -0.73
TTC39A-201ENST00000262675 TBX10O75333 385 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 MARSP56192 900 aaKnown RBP10.46□□□□□ -0.73
TTC39A-201ENST00000262675 NHLH1Q02575 133 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 MCM6Q14566 821 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 CBX2Q14781 532 aaPredicted RBP10.46□□□□□ -0.73
TTC39A-201ENST00000262675 HSP90B2PQ58FF3 399 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 MTHFD1LQ6UB35 978 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 ZNF572Q7Z3I7 529 aaPredicted RBP10.46□□□□□ -0.73
TTC39A-201ENST00000262675 LOXHD1Q8IVV2 1947 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 CCDC65Q8IXS2 484 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 SLFN12Q8IYM2 578 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 RNF10Q8N5U6 811 aaKnown RBP10.46□□□□□ -0.73
TTC39A-201ENST00000262675 KLHL23Q8NBE8 558 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 RSPH1Q8WYR4 309 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 ALS2CR12Q96Q35 445 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 ELAC1Q9H777 363 aaKnown RBP10.46□□□□□ -0.73
TTC39A-201ENST00000262675 ZSWIM4Q9H7M6 989 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 ALG13Q9NP73 1137 aaKnown RBP10.46□□□□□ -0.73
TTC39A-201ENST00000262675 SLC39A2Q9NP94 309 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 DDX25Q9UHL0 483 aaKnown RBP10.46□□□□□ -0.73
TTC39A-201ENST00000262675 TCEAL9Q9UHQ7 104 aa10.46□□□□□ -0.73
TTC39A-201ENST00000262675 CYP3A7-CYP3A51PA0A087WV96 503 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 IGKV6D-21A0A0A0MT36 114 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 LOC730098B7Z3J9 87 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 TBX3O15119 743 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 PJA2O43164 708 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 MARCH6O60337 910 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 TCP1P17987 556 aaKnown RBP10.46□□□□□ -0.74
TTC39A-201ENST00000262675 CYP3A7P24462 503 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 NUBP1P53384 320 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 PTPN5P54829 565 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 MAPK8IP2Q13387 824 aaPredicted RBP10.46□□□□□ -0.74
TTC39A-201ENST00000262675 UBE2SQ16763 222 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 SLC24A5Q71RS6 500 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 FAM71BQ8TC56 605 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 ATP8B4Q8TF62 1192 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 POF1BQ8WVV4 589 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 LINC01599Q8WXQ3 324 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 DDX12PQ92771 950 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 FBXL18Q96ME1 805 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 PNKPQ96T60 521 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 PCYT2Q99447 389 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 PHF7Q9BWX1 381 aaPredicted RBP10.46□□□□□ -0.74
TTC39A-201ENST00000262675 ABCB6Q9NP58 842 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 RGS18Q9NS28 235 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 TMEM260Q9NX78 707 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 RNF14Q9UBS8 474 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 PCDHA12Q9UN75 941 aa10.46□□□□□ -0.74
TTC39A-201ENST00000262675 MUC6Q6W4X9 2439 aa10.45□□□□□ -0.74
TTC39A-201ENST00000262675 DENND3A2RUS2 1198 aa10.45□□□□□ -0.74
TTC39A-201ENST00000262675 MEIS1O00470 390 aa10.45□□□□□ -0.74
TTC39A-201ENST00000262675 SLC37A4O43826 429 aa10.45□□□□□ -0.74
TTC39A-201ENST00000262675 RPS6KA5O75582 802 aa10.45□□□□□ -0.74
TTC39A-201ENST00000262675 ABL1P00519 1130 aa10.45□□□□□ -0.74
TTC39A-201ENST00000262675 LAG3P18627 525 aa10.45□□□□□ -0.74
TTC39A-201ENST00000262675 ZNF76P36508 570 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms