RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 RABGGTBP53611 331 aa18.08■□□□□ 0.49
CHCHD3-201ENST00000262570 SNRNP35Q16560 246 aaKnown RBP18.08■□□□□ 0.49
CHCHD3-201ENST00000262570 NOMO2Q5JPE7 1267 aa18.08■□□□□ 0.49
CHCHD3-201ENST00000262570 RDH13Q8NBN7 331 aa18.08■□□□□ 0.49
CHCHD3-201ENST00000262570 MIOSQ9NXC5 875 aa18.08■□□□□ 0.49
CHCHD3-201ENST00000262570 CNTN3Q9P232 1028 aa18.08■□□□□ 0.49
CHCHD3-201ENST00000262570 INPP5FQ9Y2H2 1132 aa18.08■□□□□ 0.49
CHCHD3-201ENST00000262570 PTGESO14684 152 aa18.08■□□□□ 0.48
CHCHD3-201ENST00000262570 CASP4P49662 377 aa18.08■□□□□ 0.48
CHCHD3-201ENST00000262570 HSP90AA2PQ14568 343 aaPredicted RBP18.08■□□□□ 0.48
CHCHD3-201ENST00000262570 LRRC55Q6ZSA7 311 aa18.08■□□□□ 0.48
CHCHD3-201ENST00000262570 BRSK2Q8IWQ3 736 aa18.08■□□□□ 0.48
CHCHD3-201ENST00000262570 CMTR2Q8IYT2 770 aaKnown RBP18.08■□□□□ 0.48
CHCHD3-201ENST00000262570 SP7Q8TDD2 431 aaPredicted RBP18.08■□□□□ 0.48
CHCHD3-201ENST00000262570 NOC3LQ8WTT2 800 aaKnown RBP18.08■□□□□ 0.48
CHCHD3-201ENST00000262570 EEF2KMTQ96G04 330 aa18.08■□□□□ 0.48
CHCHD3-201ENST00000262570 RBAKQ9NYW8 714 aaPredicted RBP18.08■□□□□ 0.48
CHCHD3-201ENST00000262570 KANSL3Q9P2N6 904 aa18.08■□□□□ 0.48
CHCHD3-201ENST00000262570 COL4A6Q14031 1691 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 SMIM28A0A1B0GU29 152 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 LACTBL1A8MY62 500 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 CETN3O15182 167 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 AKAP3O75969 853 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 KCNE1P15382 129 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 SCNN1GP51170 649 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 PPP2R3AQ06190 1150 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 BTG3Q14201 252 aaPredicted RBP18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 LRIT3Q3SXY7 679 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 C11orf57Q6ZUT1 292 aaPredicted RBP18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 CD302Q8IX05 232 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 URGCPQ8TCY9 931 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 ZMAT2Q96NC0 199 aaKnown RBP18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 RPS6KC1Q96S38 1066 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 MRPL9Q9BYD2 267 aaKnown RBP18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 PBX4Q9BYU1 374 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 ASB7Q9H672 318 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 TBC1D13Q9NVG8 400 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 PLAGL2Q9UPG8 496 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 FRMD4BQ9Y2L6 1034 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 PCDHA11Q9Y5I1 949 aa18.07■□□□□ 0.48
CHCHD3-201ENST00000262570 MAPK13O15264 365 aa18.06■□□□□ 0.48
CHCHD3-201ENST00000262570 POMCP01189 267 aa18.06■□□□□ 0.48
CHCHD3-201ENST00000262570 MYOGP15173 224 aa18.06■□□□□ 0.48
CHCHD3-201ENST00000262570 WNT7BP56706 349 aa18.06■□□□□ 0.48
CHCHD3-201ENST00000262570 PAN2Q504Q3 1202 aaKnown RBP18.06■□□□□ 0.48
CHCHD3-201ENST00000262570 CEP135Q66GS9 1140 aa18.06■□□□□ 0.48
CHCHD3-201ENST00000262570 CSGALNACT2Q8N6G5 542 aa18.06■□□□□ 0.48
CHCHD3-201ENST00000262570 MFSD14AQ96MC6 490 aa18.06■□□□□ 0.48
CHCHD3-201ENST00000262570 MKNK1Q9BUB5 465 aa18.06■□□□□ 0.48
CHCHD3-201ENST00000262570 DNAJC25Q9H1X3 360 aa18.06■□□□□ 0.48
CHCHD3-201ENST00000262570 LCHNA4D1U4 455 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 IL18RAPO95256 599 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 THP07101 528 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 PSMC2P35998 433 aaKnown RBP18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 PBX2P40425 430 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 SMAD3P84022 425 aaKnown RBP18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 CYP24A1Q07973 514 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 GRIK3Q13003 919 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 NAB2Q15742 525 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 ANO6Q4KMQ2 910 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 GLRA4Q5JXX5 417 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 LRRC43Q8N309 656 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 FAM212AQ96EL1 285 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 CEP63Q96MT8 703 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 PPP1R10Q96QC0 940 aaKnown RBP18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 GZF1Q9H116 711 aaPredicted RBP18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 PDE11AQ9HCR9 933 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 TRIOBPQ9H2D6 2365 aa18.05■□□□□ 0.48
CHCHD3-201ENST00000262570 ZBTB6Q15916 424 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 FILIP1Q7Z7B0 1213 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 ZNF280BQ86YH2 543 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 TSPAN18Q96SJ8 248 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 SRRTQ9BXP5 876 aaKnown RBP18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 CWH43Q9H720 699 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 HCSTQ9UBK5 93 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 YBX2Q9Y2T7 364 aaKnown RBP18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 FNDC1Q4ZHG4 1894 aaPredicted RBP18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 SLC16A3O15427 465 aaKnown RBP18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 DDHD2O94830 711 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 LINC00271P0C7V0 271 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 MCCD1P59942 119 aaPredicted RBP18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 RNASELQ05823 741 aaKnown RBP18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 SPAG1Q07617 926 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 DSC1Q08554 894 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 PSMD6Q15008 389 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 SURF1Q15526 300 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 RAB30Q15771 203 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 JADE1Q6IE81 842 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 FAM186BQ8IYM0 893 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 FIBCD1Q8N539 461 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 ENOX1Q8TC92 643 aaKnown RBP18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 KIF12Q96FN5 646 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 BORCS6Q96GS4 357 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 MSRAQ9UJ68 235 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 DERAQ9Y315 318 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 C2CD2Q9Y426 696 aa18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 MRPL42Q9Y6G3 142 aaKnown RBP18.04■□□□□ 0.48
CHCHD3-201ENST00000262570 LINC01553A4QN01 128 aa18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 CITO14578 2027 aa18.03■□□□□ 0.48
CHCHD3-201ENST00000262570 B4GALT3O60512 393 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms