RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 ZBTB42B2RXF5 422 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 INPPL1O15357 1258 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 LILRB5O75023 590 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 ATG7O95352 703 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 C22orf31O95567 290 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 GALTP07902 379 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 NLRP11P59045 1033 aaKnown RBP14.65□□□□□ -0.06
SGCA-201ENST00000262018 HTR4Q13639 388 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 MORC3Q14149 939 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 DHX40Q8IX18 779 aaKnown RBP14.65□□□□□ -0.06
SGCA-201ENST00000262018 BBXQ8WY36 941 aaPredicted RBP14.65□□□□□ -0.06
SGCA-201ENST00000262018 SMG7Q92540 1137 aaKnown RBP14.65□□□□□ -0.06
SGCA-201ENST00000262018 LENG9Q96B70 501 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 ZNF668Q96K58 619 aaPredicted RBP14.65□□□□□ -0.06
SGCA-201ENST00000262018 MMTAG2Q9BU76 263 aaKnown RBP14.65□□□□□ -0.06
SGCA-201ENST00000262018 GBP3Q9H0R5 595 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 AGO4Q9HCK5 861 aaKnown RBP14.65□□□□□ -0.06
SGCA-201ENST00000262018 LRWD1Q9UFC0 647 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 MTF2Q9Y483 593 aaPredicted RBP14.65□□□□□ -0.06
SGCA-201ENST00000262018 NUMBLQ9Y6R0 609 aa14.65□□□□□ -0.06
SGCA-201ENST00000262018 FASNP49327 2511 aaKnown RBP14.64□□□□□ -0.07
SGCA-201ENST00000262018 ANHXE9PGG2 379 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 DDX39AO00148 427 aaKnown RBP14.64□□□□□ -0.07
SGCA-201ENST00000262018 IPO5O00410 1097 aaKnown RBP14.64□□□□□ -0.07
SGCA-201ENST00000262018 SLC26A4O43511 780 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 LAMP2P13473 410 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 FGFR4P22455 802 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 AFMP43652 599 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 CLCN3P51790 818 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 GPC5P78333 572 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 RNASELQ05823 741 aaKnown RBP14.64□□□□□ -0.07
SGCA-201ENST00000262018 ITGB3BPQ13352 177 aaPredicted RBP14.64□□□□□ -0.07
SGCA-201ENST00000262018 TSSK4Q6SA08 328 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 CYP26C1Q6V0L0 522 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 GET4Q7L5D6 327 aaPredicted RBP14.64□□□□□ -0.07
SGCA-201ENST00000262018 TRMT1LQ7Z2T5 733 aaKnown RBP14.64□□□□□ -0.07
SGCA-201ENST00000262018 SLFN12Q8IYM2 578 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 ETNPPLQ8TBG4 499 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 GSDMAQ96QA5 445 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 MTRQ99707 1265 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 ZNF577Q9BSK1 485 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 TTC12Q9H892 705 aaPredicted RBP14.64□□□□□ -0.07
SGCA-201ENST00000262018 PIDD1Q9HB75 910 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 AKT3Q9Y243 479 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 INPP5FQ9Y2H2 1132 aa14.64□□□□□ -0.07
SGCA-201ENST00000262018 MIA3Q5JRA6 1907 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 IGKV6D-21A0A0A0MT36 114 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 FAM170BA6NMN3 283 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 GOLGA6L19H0YKK7 550 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 C2CD2LO14523 706 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 AP5Z1O43299 807 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 MARCH6O60337 910 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 RFPL2O75678 378 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 MYL1P05976 194 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 BMP6P22004 513 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 EIF4BP23588 611 aaKnown RBP14.63□□□□□ -0.07
SGCA-201ENST00000262018 SLC11A1P49279 550 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 LPAL2Q16609 132 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 ELMSAN1Q6PJG2 1045 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 CCDC60Q8IWA6 550 aaPredicted RBP14.63□□□□□ -0.07
SGCA-201ENST00000262018 MLKLQ8NB16 471 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 LPPQ93052 612 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 CALML4Q96GE6 196 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 FAM20AQ96MK3 541 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 ADAMTS10Q9H324 1103 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 ZNF302Q9NR11 478 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 MRPL17Q9NRX2 175 aaKnown RBP14.63□□□□□ -0.07
SGCA-201ENST00000262018 TBC1D22BQ9NU19 505 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 TBC1D13Q9NVG8 400 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 KBTBD4Q9NVX7 518 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.63□□□□□ -0.07
SGCA-201ENST00000262018 DNAJB4Q9UDY4 337 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 RAB23Q9ULC3 237 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 PCDHA12Q9UN75 941 aa14.63□□□□□ -0.07
SGCA-201ENST00000262018 ANKRD11Q6UB99 2663 aaPredicted RBP14.63□□□□□ -0.07
SGCA-201ENST00000262018 DOCK8Q8NF50 2099 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 SMTNL1A8MU46 457 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 BECN2A8MW95 431 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 IKBKBO14920 756 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 MSH4O15457 936 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 LILRB3O75022 631 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 ADCY5O95622 1261 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 CCNE2O96020 404 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 PLCG1P19174 1290 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 MLF2Q15773 248 aaPredicted RBP14.62□□□□□ -0.07
SGCA-201ENST00000262018 NOMO2Q5JPE7 1267 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 CT47A1Q5JQC4 288 aaPredicted RBP14.62□□□□□ -0.07
SGCA-201ENST00000262018 ISM2Q6H9L7 571 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 ABHD15Q6UXT9 468 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 AOPEPQ8N6M6 819 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 RASSF8Q8NHQ8 419 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 LRRC15Q8TF66 581 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 NELL1Q92832 810 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 SCLT1Q96NL6 688 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 MAP7D2Q96T17 732 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 RPP25Q9BUL9 199 aaKnown RBP14.62□□□□□ -0.07
SGCA-201ENST00000262018 RHOBTB2Q9BYZ6 727 aa14.62□□□□□ -0.07
SGCA-201ENST00000262018 ATP4AP20648 1035 aa14.61□□□□□ -0.07
SGCA-201ENST00000262018 TMEM119Q4V9L6 283 aa14.61□□□□□ -0.07
SGCA-201ENST00000262018 HYIQ5T013 277 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms