RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 SNRPFP62306 86 aaKnown RBP14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 DR1Q01658 176 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 PPARDQ03181 441 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 KCNH2Q12809 1159 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 ELAVL2Q12926 359 aaKnown RBP14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 BRD3Q15059 726 aa14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 ZNF746Q6NUN9 644 aaPredicted RBP14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 ALKBH5Q6P6C2 394 aaKnown RBP14.38□□□□□ -0.11
PDGFRB-201ENST00000261799 CLTAP09496 248 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 GNL1P36915 607 aaPredicted RBP14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 BTG3Q14201 252 aaPredicted RBP14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 KIF19Q2TAC6 998 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 NBPF9Q3BBW0 867 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 CD302Q8IX05 232 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 PDZD8Q8NEN9 1154 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 CCDC124Q96CT7 223 aaKnown RBP14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 GAS2L1Q99501 681 aaPredicted RBP14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 MRPL9Q9BYD2 267 aaKnown RBP14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 MIF4GDA9UHW6 222 aaKnown RBP14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 PPFIA2O75334 1257 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 NAA25Q14CX7 972 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 ZNF564Q8TBZ8 553 aaPredicted RBP14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 RAPGEF5Q92565 580 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 PLSCR1O15162 318 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 PLTPP55058 493 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 PPATQ06203 517 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 MFN1Q8IWA4 741 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 RSRC1Q96IZ7 334 aaKnown RBP14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 ANKEF1Q9NU02 776 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 RGL1Q9NZL6 768 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 MYO3AQ8NEV4 1616 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 TMEM88BA6NKF7 163 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 ZRANB2O95218 330 aaKnown RBP eCLIP14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 BCAR1P56945 870 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 ADCK2Q7Z695 626 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 TRIM15Q9C019 465 aa14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 SENP6Q9GZR1 1112 aaPredicted RBP14.37□□□□□ -0.11
PDGFRB-201ENST00000261799 HIST1H2AGP0C0S8 130 aaPredicted RBP14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 HIST1H2ADP20671 130 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 PCK1P35558 622 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 CTXN3Q4LDR2 81 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 HERC6Q8IVU3 1022 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 SRBD1Q8N5C6 995 aaKnown RBP14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 HIST1H2AHQ96KK5 128 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 HIST1H2AJQ99878 128 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 H2AFJQ9BTM1 129 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 POLD4Q9HCU8 107 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 ADAMTS13Q76LX8 1427 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 IGSF9BQ9UPX0 1349 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 CUL1Q13616 776 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 RGMBQ6NW40 437 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 NT5C1AQ9BXI3 368 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 Q9H521 79 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 OLFML3Q9NRN5 406 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 NAGPAQ9UK23 515 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 TNS2Q63HR2 1409 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 NPM3O75607 178 aaKnown RBP14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 ALDH1A2O94788 518 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 SERPIND1P05546 499 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 RPS6P62753 249 aaKnown RBP14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 SP3Q02447 781 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 ATG16L1Q676U5 607 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 INO80Q9ULG1 1556 aaPredicted RBP14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 ITSN1Q15811 1721 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 EEF2KO00418 725 aaKnown RBP14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 ADCY3O60266 1144 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 CDC27P30260 824 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 ACOT2P49753 483 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 ACTR2P61160 394 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 SEMA3FQ13275 785 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 LMBRD2Q68DH5 695 aaPredicted RBP14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 FRMD5Q7Z6J6 570 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 FAM83AQ86UY5 434 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 WDR35Q9P2L0 1181 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 TSR3Q9UJK0 312 aaKnown RBP14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 LRRC7Q96NW7 1537 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 EXOC1LA0A1B0GW35 172 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 KPNA7A9QM74 516 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 ALDH2P05091 517 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 SLC2A3P11169 496 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 PLA2G4FQ68DD2 849 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 SELENONQ9NZV5 590 aa14.36□□□□□ -0.11
PDGFRB-201ENST00000261799 EXTL3O43909 919 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 PYGLP06737 847 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 AVPR1AP37288 418 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 HERVK_113P62684 666 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 OCRLQ01968 901 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 NCOA4Q13772 614 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 SGMS1Q86VZ5 419 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 CHSY1Q86X52 802 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 MORC4Q8TE76 937 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 SAMSN1Q9NSI8 373 aaKnown RBP14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 HSPA4LO95757 839 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 FAM200BP0CF97 657 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 ARHGAP25P42331 645 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 PPIL2Q13356 520 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 STARD3Q14849 445 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 PTGISQ16647 500 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 PHKG1Q16816 387 aa14.35□□□□□ -0.11
PDGFRB-201ENST00000261799 DPCR1Q3MIW9 517 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms