RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 PNKPQ96T60 521 aa11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 KDM5BQ9UGL1 1544 aa11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 CUL7Q14999 1698 aa11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 PSMC3P17980 439 aa11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 LRRC24Q50LG9 513 aa11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 MFSD4BQ5TF39 518 aa11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 CC2D2BQ6DHV5 1058 aa11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 CCDC80Q76M96 950 aa11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 CDH24Q86UP0 819 aa11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 RHPN2Q8IUC4 686 aa11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 TRIM10Q9UDY6 481 aa11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.33□□□□□ -0.6
SLC6A4-201ENST00000261707 ROR1Q01973 937 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 KCNH2Q12809 1159 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 TFDP2Q14188 446 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 IP6K1Q92551 441 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 KLHL8Q9P2G9 620 aaPredicted RBP11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 NXF1Q9UBU9 619 aaKnown RBP11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 HEY1Q9Y5J3 304 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 UBN2Q6ZU65 1347 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 TRIM49P0CI25 452 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 TRIM49CP0CI26 452 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 Q4G0T1 1027 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 DNAJC10Q8IXB1 793 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 NOA1Q8NC60 698 aaKnown RBP11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 ADAM33Q9BZ11 813 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 KLHL4Q9C0H6 718 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 DCLRE1BQ9H816 532 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 GOLGA8JA6NMD2 632 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 PSMD14O00487 310 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 CTSWP56202 376 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 RASGRF1Q13972 1273 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 FASTKD1Q53R41 847 aaKnown RBP11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 CCDC81Q6ZN84 652 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 MMGT1Q8N4V1 131 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 HEXIM2Q96MH2 286 aaKnown RBP11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 ISCUQ9H1K1 167 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 MANSC1Q9H8J5 431 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 EXOSC4Q9NPD3 245 aaKnown RBP11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 KPNA4O00629 521 aaPredicted RBP11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 A1BGP04217 495 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 HMOX2P30519 316 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 VEPH1Q14D04 833 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 LVRNQ6Q4G3 990 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 RFFLQ8WZ73 363 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 MTERF3Q96E29 417 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 SLC52A2Q9HAB3 445 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 SMARCAL1Q9NZC9 954 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 DUOX2Q9NRD8 1548 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 KRT72Q14CN4 511 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 PPP6R3Q5H9R7 873 aaPredicted RBP11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 RCSD1Q6JBY9 416 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 SCARA5Q6ZMJ2 495 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 GLMNQ92990 594 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 SEL1LQ9UBV2 794 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 HACL1Q9UJ83 578 aa11.32□□□□□ -0.6
SLC6A4-201ENST00000261707 BTDP43251 543 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 ABCE1P61221 599 aaKnown RBP11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 TFAMQ00059 246 aaKnown RBP11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 OASLQ15646 514 aaKnown RBP11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 IZUMO2Q6UXV1 221 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 MIEF2Q96C03 454 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 TRAPPC9Q96Q05 1148 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 CHP1Q99653 195 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 F5H423 210 aaPredicted RBP11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 H3BQF6 201 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 hCG_1984214I3L0E3 225 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 USP1O94782 785 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 SLC20A2Q08357 652 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 PASD1Q8IV76 773 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 SPICE1Q8N0Z3 855 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 SIX5Q8N196 739 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 ZNF713Q8N859 430 aaPredicted RBP11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 ATL2Q8NHH9 583 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 AGBL1Q96MI9 1066 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 ASNSD1Q9NWL6 643 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 C6orf203Q9P0P8 240 aaPredicted RBP11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 IP6K2Q9UHH9 426 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 KIAA0586Q9BVV6 1533 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 A0A1B0GTH6 734 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 MYO1GB0I1T2 1018 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 SRGAP2CP0DJJ0 459 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 ITIH2P19823 946 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 TAF1CQ15572 869 aaPredicted RBP11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 TMC4Q7Z404 712 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 AFG1LQ8WV93 481 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 EPAS1Q99814 870 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 DDX56Q9NY93 547 aaKnown RBP11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 C15orf41Q9Y2V0 281 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 HSD17B3P37058 310 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 LBRQ14739 615 aaKnown RBP11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 C16orf72Q14CZ0 275 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 CCDC149Q6ZUS6 474 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 APOBEC3FQ8IUX4 373 aaKnown RBP11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 ITIH6Q6UXX5 1313 aa11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 URB2Q14146 1524 aaKnown RBP11.31□□□□□ -0.6
SLC6A4-201ENST00000261707 ALBP02768 609 aa11.3□□□□□ -0.6
SLC6A4-201ENST00000261707 ALCAMQ13740 583 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms