RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 FGFR1P11362 822 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 PSMC2P35998 433 aaKnown RBP15.34■□□□□ 0.05
VPS25-201ENST00000253794 MLH1P40692 756 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 MARSP56192 900 aaKnown RBP15.34■□□□□ 0.05
VPS25-201ENST00000253794 ZNF445P59923 1031 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 OSTNP61366 133 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 SURF1Q15526 300 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 NAB2Q15742 525 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 ZBTB6Q15916 424 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 SEZ6Q53EL9 994 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 NOMO2Q5JPE7 1267 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 FILIP1Q7Z7B0 1213 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 NT5DC4Q86YG4 428 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 RNF169Q8NCN4 708 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 ENOX1Q8TC92 643 aaKnown RBP15.34■□□□□ 0.05
VPS25-201ENST00000253794 HELQQ8TDG4 1101 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 BORCS6Q96GS4 357 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 PPP1R10Q96QC0 940 aaKnown RBP15.34■□□□□ 0.05
VPS25-201ENST00000253794 GAD1Q99259 594 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 RBAKQ9NYW8 714 aaPredicted RBP15.34■□□□□ 0.05
VPS25-201ENST00000253794 KANSL3Q9P2N6 904 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 PARP2Q9UGN5 583 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 FRMD4BQ9Y2L6 1034 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 C2CD2Q9Y426 696 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 INSL6Q9Y581 213 aa15.34■□□□□ 0.05
VPS25-201ENST00000253794 GOLGA8IPA6NC78 632 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 GOLGA8JA6NMD2 632 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 UPP2O95045 317 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 CASP4P49662 377 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 STX17P56962 302 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 CLDN10P78369 228 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 PPP2R3AQ06190 1150 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 CYP24A1Q07973 514 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 GRIK3Q13003 919 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 PSMD6Q15008 389 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 LRIT3Q3SXY7 679 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 ANO6Q4KMQ2 910 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 TMCO2Q7Z6W1 182 aaPredicted RBP15.33■□□□□ 0.04
VPS25-201ENST00000253794 ABI1Q8IZP0 508 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 LRRC43Q8N309 656 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 CSGALNACT2Q8N6G5 542 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 NOC3LQ8WTT2 800 aaKnown RBP15.33■□□□□ 0.04
VPS25-201ENST00000253794 ZFP42Q96MM3 310 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 APOL6Q9BWW8 343 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 NAT10Q9H0A0 1025 aaKnown RBP15.33■□□□□ 0.04
VPS25-201ENST00000253794 GZF1Q9H116 711 aaPredicted RBP15.33■□□□□ 0.04
VPS25-201ENST00000253794 DNAJC25Q9H1X3 360 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 PCDHA11Q9Y5I1 949 aa15.33■□□□□ 0.04
VPS25-201ENST00000253794 FNDC1Q4ZHG4 1894 aaPredicted RBP15.32■□□□□ 0.04
VPS25-201ENST00000253794 SMIM28A0A1B0GU29 152 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 CARNS1A5YM72 827 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 LACTBL1A8MY62 500 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 IKBKBO14920 756 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 FGFR1OPO95684 399 aaKnown RBP15.32■□□□□ 0.04
VPS25-201ENST00000253794 GNA14O95837 355 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 CYP3A5P20815 502 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 GATMP50440 423 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 AFF1P51825 1210 aaKnown RBP15.32■□□□□ 0.04
VPS25-201ENST00000253794 WNT7BP56706 349 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 SMAD3P84022 425 aaKnown RBP15.32■□□□□ 0.04
VPS25-201ENST00000253794 DSC1Q08554 894 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 SPATA1Q5VX52 437 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 FAM109BQ6ICB4 259 aaPredicted RBP15.32■□□□□ 0.04
VPS25-201ENST00000253794 LRSAM1Q6UWE0 723 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 INTS8Q75QN2 995 aaKnown RBP15.32■□□□□ 0.04
VPS25-201ENST00000253794 URGCPQ8TCY9 931 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 TMC2Q8TDI7 906 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 PARD3BQ8TEW8 1205 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 ZMAT2Q96NC0 199 aaKnown RBP15.32■□□□□ 0.04
VPS25-201ENST00000253794 RPS6KC1Q96S38 1066 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 YME1L1Q96TA2 773 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 CXCL16Q9H2A7 254 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 THAP9Q9H5L6 903 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 TBC1D13Q9NVG8 400 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 MIOSQ9NXC5 875 aa15.32■□□□□ 0.04
VPS25-201ENST00000253794 CITO14578 2027 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 TBKBP1A7MCY6 615 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 TLL1O43897 1013 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 THP07101 528 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 LINC00271P0C7V0 271 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 EPB41P11171 864 aaKnown RBP15.31■□□□□ 0.04
VPS25-201ENST00000253794 SCNN1GP51170 649 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 MYL5Q02045 173 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 RAB30Q15771 203 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 FRMD5Q7Z6J6 570 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 IRF2BP1Q8IU81 584 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 FAM186BQ8IYM0 893 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 PLEKHO2Q8TD55 490 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 CLP1Q92989 425 aaKnown RBP15.31■□□□□ 0.04
VPS25-201ENST00000253794 ZBED2Q9BTP6 218 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 CWH43Q9H720 699 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 METTL14Q9HCE5 456 aaKnown RBP15.31■□□□□ 0.04
VPS25-201ENST00000253794 SLC38A7Q9NVC3 462 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 KLK14Q9P0G3 267 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 PLAGL2Q9UPG8 496 aa15.31■□□□□ 0.04
VPS25-201ENST00000253794 COLQQ9Y215 455 aaPredicted RBP15.31■□□□□ 0.04
VPS25-201ENST00000253794 ANK1P16157 1881 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 ZNF165P49910 485 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 BFSP1Q12934 665 aa15.3■□□□□ 0.04
VPS25-201ENST00000253794 PDCD11Q14690 1871 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms