RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 POLD3Q15054 466 aaPredicted RBP15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 KNOP1Q1ED39 458 aaKnown RBP15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 CATSPERBQ9H7T0 1116 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 ARL4CP56559 192 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 BCAR1P56945 870 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 LAMB3Q13751 1172 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 ADCK5Q3MIX3 580 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 CTXN3Q4LDR2 81 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 ATP6V0D2Q8N8Y2 350 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 MOV10L1Q9BXT6 1211 aaKnown RBP15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 INTS2Q9H0H0 1204 aaKnown RBP15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 PPP2R2CQ9Y2T4 447 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 TAP1Q03518 808 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 ZNF177Q13360 481 aaPredicted RBP15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 TRIM72Q6ZMU5 477 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 GPC2Q8N158 579 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 CHST12Q9NRB3 414 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 PRR12Q9ULL5 1215 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 TSEN34Q9BSV6 310 aaKnown RBP15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 CDV3Q9UKY7 258 aaKnown RBP15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 EXOC1LA0A1B0GW35 172 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 KPNA7A9QM74 516 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 GOLGA8KD6RF30 607 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 MAFGO15525 162 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 PSMD3O43242 534 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 ERVK-10P10266 1014 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 TAF6P49848 677 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 GBP5Q96PP8 586 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 ZC4H2Q9NQZ6 224 aa15.15■□□□□ 0.02
ZC3H4-201ENST00000253048 RPL10AP62906 217 aaKnown RBP15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 L3MBTL1Q9Y468 752 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 ALDH2P05091 517 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 PPM1LQ5SGD2 360 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 C12orf60Q5U649 245 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 AHCYL2Q96HN2 611 aaKnown RBP15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 MTMR4Q9NYA4 1195 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 BFARQ9NZS9 450 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 PLA2G4CQ9UP65 541 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 SPACA6W5XKT8 324 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 ZBTB17Q13105 803 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 XRRA1Q6P2D8 792 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 NKX2-3Q8TAU0 364 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 TRPM5Q9NZQ8 1165 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 ITIH6Q6UXX5 1313 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 FTCDO95954 541 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 LMBRD2Q68DH5 695 aaPredicted RBP15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 PID1Q7Z2X4 250 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 NSUN4Q96CB9 384 aaKnown RBP15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 EIF4A3P38919 411 aaKnown RBP15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 MAPK9P45984 424 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 MAP3K7CLP57077 242 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 PDCLQ13371 301 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 PDIA6Q15084 440 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 PLCL1Q15111 1095 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 ZNF438Q7Z4V0 828 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 CALR3Q96L12 384 aaKnown RBP15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 ZFP42Q96MM3 310 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 GPR63Q9BZJ6 419 aa15.14■□□□□ 0.01
ZC3H4-201ENST00000253048 EPB42P16452 691 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 INHBEP58166 350 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 DGKZQ13574 1117 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 SLFNL1Q499Z3 407 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 ZNF484Q5JVG2 852 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 PATL1Q86TB9 770 aaKnown RBP15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 CCDC138Q96M89 665 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 CINPQ9BW66 212 aaPredicted RBP15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 VPS11Q9H270 941 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 TUBE1Q9UJT0 475 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 ORC4O43929 436 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 KRT37O76014 449 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 RGS7P49802 495 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 COPS2P61201 443 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 GPC5P78333 572 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 RBL2Q08999 1139 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 TARBP1Q13395 1621 aaKnown RBP15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 ZRANB2O95218 330 aaKnown RBP eCLIP15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 PGK2P07205 417 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 AKR1A1P14550 325 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 KCNA2P16389 499 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 ACADSBP45954 432 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 HERC6Q8IVU3 1022 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 CARNMT1Q8N4J0 409 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 ECT2Q9H8V3 914 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 TECPR2O15040 1411 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 EYA4O95677 639 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 U2AF2P26368 475 aaKnown RBP eCLIP15.13■□□□□ 0.013e-7■■■□□ 15.6
ZC3H4-201ENST00000253048 CLNS1AP54105 237 aaKnown RBP15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 IKBKEQ14164 716 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 RNF135Q8IUD6 432 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 SNX31Q8N9S9 440 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 RGS12O14924 1447 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 SLC45A4Q5BKX6 768 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 MTBPQ96DY7 904 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 KLK14Q9P0G3 267 aa15.13■□□□□ 0.01
ZC3H4-201ENST00000253048 SUPT3HB4E1H0 165 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 EEF2KO00418 725 aaKnown RBP15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 CHRNA3P32297 505 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 USP33Q8TEY7 942 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 218 ms