RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 E9PMD0 336 aa23.16■■□□□ 1.3
NEDD8-201ENST00000250495 GALR2O43603 387 aaPredicted RBP23.16■■□□□ 1.3
NEDD8-201ENST00000250495 ZMYND10O75800 440 aa23.16■■□□□ 1.3
NEDD8-201ENST00000250495 RABEP1Q15276 862 aa23.16■■□□□ 1.3
NEDD8-201ENST00000250495 LNX1Q8TBB1 728 aaPredicted RBP23.16■■□□□ 1.3
NEDD8-201ENST00000250495 ATOH1Q92858 354 aaPredicted RBP23.16■■□□□ 1.3
NEDD8-201ENST00000250495 NXPE3Q969Y0 559 aa23.16■■□□□ 1.3
NEDD8-201ENST00000250495 CLSTN3Q9BQT9 956 aa23.16■■□□□ 1.3
NEDD8-201ENST00000250495 CXCL16Q9H2A7 254 aa23.16■■□□□ 1.3
NEDD8-201ENST00000250495 TMEM134Q9H6X4 195 aa23.16■■□□□ 1.3
NEDD8-201ENST00000250495 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.16■■□□□ 1.3
NEDD8-201ENST00000250495 TNFSF13BQ9Y275 285 aa23.16■■□□□ 1.3
NEDD8-201ENST00000250495 ST18O60284 1047 aa23.15■■□□□ 1.3
NEDD8-201ENST00000250495 N4BP1O75113 896 aaKnown RBP23.15■■□□□ 1.3
NEDD8-201ENST00000250495 PEX3P56589 373 aa23.15■■□□□ 1.3
NEDD8-201ENST00000250495 PSMD5Q16401 504 aa23.15■■□□□ 1.3
NEDD8-201ENST00000250495 DCLRE1AQ6PJP8 1040 aa23.15■■□□□ 1.3
NEDD8-201ENST00000250495 TMEM105Q8N8V8 129 aa23.15■■□□□ 1.3
NEDD8-201ENST00000250495 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.15■■□□□ 1.3
NEDD8-201ENST00000250495 FBXL21Q9UKT6 434 aa23.15■■□□□ 1.3
NEDD8-201ENST00000250495 RBM19Q9Y4C8 960 aaKnown RBP23.15■■□□□ 1.3
NEDD8-201ENST00000250495 CACNA1HO95180 2353 aa23.15■■□□□ 1.3
NEDD8-201ENST00000250495 NPTX2P47972 431 aa23.14■■□□□ 1.29
NEDD8-201ENST00000250495 DMP1Q13316 513 aaPredicted RBP23.14■■□□□ 1.29
NEDD8-201ENST00000250495 RILPL1Q5EBL4 403 aa23.14■■□□□ 1.29
NEDD8-201ENST00000250495 MCTP1Q6DN14 999 aa23.14■■□□□ 1.29
NEDD8-201ENST00000250495 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.14■■□□□ 1.29
NEDD8-201ENST00000250495 DRC1Q96MC2 740 aa23.14■■□□□ 1.29
NEDD8-201ENST00000250495 UROC1Q96N76 676 aa23.14■■□□□ 1.29
NEDD8-201ENST00000250495 PPP1R10Q96QC0 940 aaKnown RBP23.14■■□□□ 1.29
NEDD8-201ENST00000250495 MYADMQ96S97 322 aa23.14■■□□□ 1.29
NEDD8-201ENST00000250495 C17orf75Q9HAS0 396 aa23.14■■□□□ 1.29
NEDD8-201ENST00000250495 KCNG1Q9UIX4 513 aa23.14■■□□□ 1.29
NEDD8-201ENST00000250495 H0Y858 1186 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 TMEM189-UBE2V1I3L0A0 370 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 HIP1RO75146 1068 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 B3GAT3O94766 335 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 YARSP54577 528 aaKnown RBP23.13■■□□□ 1.29
NEDD8-201ENST00000250495 IL17AQ16552 155 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 LIN9Q5TKA1 542 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 RINT1Q6NUQ1 792 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 KCTD17Q8N5Z5 321 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 FLCNQ8NFG4 579 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 ACO2Q99798 780 aaKnown RBP23.13■■□□□ 1.29
NEDD8-201ENST00000250495 TIPINQ9BVW5 301 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 CCDC94Q9BW85 323 aaPredicted RBP23.13■■□□□ 1.29
NEDD8-201ENST00000250495 MRPL4Q9BYD3 311 aaKnown RBP23.13■■□□□ 1.29
NEDD8-201ENST00000250495 KMT5AQ9NQR1 393 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 TOPORSQ9NS56 1045 aaPredicted RBP23.13■■□□□ 1.29
NEDD8-201ENST00000250495 FBXW11Q9UKB1 542 aa23.13■■□□□ 1.29
NEDD8-201ENST00000250495 TRIP11Q15643 1979 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 PP2D1A8MPX8 630 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 TRAPPC3O43617 180 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 HNRNPA1P09651 372 aaKnown RBP eCLIP23.12■■□□□ 1.29
NEDD8-201ENST00000250495 LAMP2P13473 410 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 CDC25AP30304 524 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 GRM5P41594 1212 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 GLRA4Q5JXX5 417 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 C1orf186Q6ZWK4 172 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 DAW1Q8N136 415 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 FAM86C1Q9NVL1 165 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 ARHGAP28Q9P2N2 729 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 WNT16Q9UBV4 365 aa23.12■■□□□ 1.29
NEDD8-201ENST00000250495 ZFP37Q9Y6Q3 630 aaPredicted RBP23.12■■□□□ 1.29
NEDD8-201ENST00000250495 SMIM28A0A1B0GU29 152 aa23.11■■□□□ 1.29
NEDD8-201ENST00000250495 FGFR3P22607 806 aa23.11■■□□□ 1.29
NEDD8-201ENST00000250495 CLCNKBP51801 687 aa23.11■■□□□ 1.29
NEDD8-201ENST00000250495 PPM1LQ5SGD2 360 aa23.11■■□□□ 1.29
NEDD8-201ENST00000250495 SLC44A3Q8N4M1 653 aa23.11■■□□□ 1.29
NEDD8-201ENST00000250495 RSAD2Q8WXG1 361 aa23.11■■□□□ 1.29
NEDD8-201ENST00000250495 RTP3Q9BQQ7 232 aa23.11■■□□□ 1.29
NEDD8-201ENST00000250495 NTPCRQ9BSD7 190 aaKnown RBP23.11■■□□□ 1.29
NEDD8-201ENST00000250495 TCHPQ9BT92 498 aa23.11■■□□□ 1.29
NEDD8-201ENST00000250495 MMTAG2Q9BU76 263 aaKnown RBP23.11■■□□□ 1.29
NEDD8-201ENST00000250495 PTPRHQ9HD43 1115 aa23.11■■□□□ 1.29
NEDD8-201ENST00000250495 DOCK8Q8NF50 2099 aa23.11■■□□□ 1.29
NEDD8-201ENST00000250495 C8AP07357 584 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 AOC1P19801 751 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 HOXA9P31269 272 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 ATP2C1P98194 919 aaPredicted RBP23.1■■□□□ 1.29
NEDD8-201ENST00000250495 RAB33AQ14088 237 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 ZRSR1Q15695 479 aaKnown RBP23.1■■□□□ 1.29
NEDD8-201ENST00000250495 UPP1Q16831 310 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 UVSSAQ2YD98 709 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 ZNF568Q3ZCX4 644 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 XKR4Q5GH76 650 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 GET4Q7L5D6 327 aaPredicted RBP23.1■■□□□ 1.29
NEDD8-201ENST00000250495 SIX5Q8N196 739 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 DDX27Q96GQ7 796 aaKnown RBP23.1■■□□□ 1.29
NEDD8-201ENST00000250495 RUSC1Q9BVN2 902 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 TARS2Q9BW92 718 aaKnown RBP23.1■■□□□ 1.29
NEDD8-201ENST00000250495 CDT1Q9H211 546 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 SLC38A7Q9NVC3 462 aa23.1■■□□□ 1.29
NEDD8-201ENST00000250495 H3BQV1 296 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 NARSO43776 548 aaKnown RBP23.09■■□□□ 1.29
NEDD8-201ENST00000250495 XYLBO75191 536 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 MCF2P10911 925 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 NPR3P17342 541 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 FSHRP23945 695 aa23.09■■□□□ 1.29
NEDD8-201ENST00000250495 GUCY2CP25092 1073 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms