RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 BHMG1C9JSJ3 638 aaPredicted RBP23.28■■□□□ 1.32
CLN6-201ENST00000249806 ARIH2O95376 493 aa23.28■■□□□ 1.32
CLN6-201ENST00000249806 HLA-DRAP01903 254 aa23.28■■□□□ 1.32
CLN6-201ENST00000249806 CAPSQ13938 189 aa23.28■■□□□ 1.32
CLN6-201ENST00000249806 Q3C1V9 767 aa23.28■■□□□ 1.32
CLN6-201ENST00000249806 ZNF564Q8TBZ8 553 aaPredicted RBP23.28■■□□□ 1.32
CLN6-201ENST00000249806 WHAMMQ8TF30 809 aa23.28■■□□□ 1.32
CLN6-201ENST00000249806 PIK3R5Q8WYR1 880 aa23.28■■□□□ 1.32
CLN6-201ENST00000249806 NEUROG2Q9H2A3 272 aa23.28■■□□□ 1.32
CLN6-201ENST00000249806 GOLGA6CA6NDK9 693 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 TTLL13PA6NNM8 815 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 KRT14P02533 472 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 CYP1A2P05177 515 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 GOLGA6DP0CG33 693 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 MARK3P27448 753 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 POU5F1Q01860 360 aaKnown RBP23.27■■□□□ 1.32
CLN6-201ENST00000249806 ENPEPQ07075 957 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 BIRC3Q13489 604 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 MAATS1Q7Z4T9 603 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 CCDC26Q8TAB7 109 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 SEPT1Q8WYJ6 367 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 ARL8AQ96BM9 186 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 RUFY1Q96T51 708 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 MSTO1Q9BUK6 570 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 GOLGA6AQ9NYA3 693 aa23.27■■□□□ 1.32
CLN6-201ENST00000249806 RBAKQ9NYW8 714 aaPredicted RBP23.27■■□□□ 1.32
CLN6-201ENST00000249806 DAPK3O43293 454 aa23.27■■□□□ 1.31
CLN6-201ENST00000249806 ZC3H11AO75152 810 aaKnown RBP eCLIP23.27■■□□□ 1.31
CLN6-201ENST00000249806 MTA2O94776 668 aa23.27■■□□□ 1.31
CLN6-201ENST00000249806 VNN1O95497 513 aa23.27■■□□□ 1.31
CLN6-201ENST00000249806 PIGRP01833 764 aa23.27■■□□□ 1.31
CLN6-201ENST00000249806 ACAD10Q6JQN1 1059 aa23.27■■□□□ 1.31
CLN6-201ENST00000249806 METTL7BQ6UX53 244 aa23.27■■□□□ 1.31
CLN6-201ENST00000249806 ERO1BQ86YB8 467 aa23.27■■□□□ 1.31
CLN6-201ENST00000249806 TGFB3P10600 412 aa23.26■■□□□ 1.31
CLN6-201ENST00000249806 HARSP12081 509 aaKnown RBP23.26■■□□□ 1.31
CLN6-201ENST00000249806 CUL1Q13616 776 aa23.26■■□□□ 1.31
CLN6-201ENST00000249806 HSDL1Q3SXM5 330 aa23.26■■□□□ 1.31
CLN6-201ENST00000249806 CFAP58Q5T655 872 aa23.26■■□□□ 1.31
CLN6-201ENST00000249806 SCARA3Q6AZY7 606 aa23.26■■□□□ 1.31
CLN6-201ENST00000249806 SLFN12LQ6IEE8 588 aa23.26■■□□□ 1.31
CLN6-201ENST00000249806 ENOSF1Q7L5Y1 443 aa23.26■■□□□ 1.31
CLN6-201ENST00000249806 TRIM50Q86XT4 487 aa23.26■■□□□ 1.31
CLN6-201ENST00000249806 MREGQ8N565 214 aa23.26■■□□□ 1.31
CLN6-201ENST00000249806 PRPF31Q8WWY3 499 aaKnown RBP23.26■■□□□ 1.31
CLN6-201ENST00000249806 ZSWIM1Q9BR11 485 aa23.26■■□□□ 1.31
CLN6-201ENST00000249806 GTF3C4Q9UKN8 822 aa23.26■■□□□ 1.31
CLN6-201ENST00000249806 A0A0B4J269 797 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 MIF4GDA9UHW6 222 aaKnown RBP23.25■■□□□ 1.31
CLN6-201ENST00000249806 SOCS7O14512 581 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 OPA1O60313 960 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 RFC5P40937 340 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 PIK3CAP42336 1068 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 PEX5P50542 639 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 TTLL12Q14166 644 aaPredicted RBP23.25■■□□□ 1.31
CLN6-201ENST00000249806 WDR44Q5JSH3 913 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 FAM160B1Q5W0V3 765 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 UBL4BQ8N7F7 174 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 RPS6KC1Q96S38 1066 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 RBPJLQ9UBG7 517 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 HNRNPH2P55795 449 aaKnown RBP23.25■■□□□ 1.31
CLN6-201ENST00000249806 PTENP60484 403 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 CLEC16AQ2KHT3 1053 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 TTMPQ5BVD1 217 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 ANKRD13AQ8IZ07 590 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 KCNN1Q92952 543 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 FGD4Q96M96 766 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 TRIM51Q9BSJ1 452 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 FHDC1Q9C0D6 1143 aaPredicted RBP23.25■■□□□ 1.31
CLN6-201ENST00000249806 PCNTO95613 3336 aa23.25■■□□□ 1.31
CLN6-201ENST00000249806 SIP14410 1827 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 ADCY3O60266 1144 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 MAFO75444 373 aaPredicted RBP23.24■■□□□ 1.31
CLN6-201ENST00000249806 EIF1ADQ8N9N8 165 aaKnown RBP23.24■■□□□ 1.31
CLN6-201ENST00000249806 FAM76AQ8TAV0 307 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 GLG1Q92896 1179 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 CD101Q93033 1021 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 NAP1L3Q99457 506 aaPredicted RBP23.24■■□□□ 1.31
CLN6-201ENST00000249806 DPH5Q9H2P9 285 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 APOBEC3GQ9HC16 384 aaKnown RBP23.24■■□□□ 1.31
CLN6-201ENST00000249806 CNOT8Q9UFF9 292 aaKnown RBP23.24■■□□□ 1.31
CLN6-201ENST00000249806 ADGRA2Q96PE1 1338 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 KIAA0391O15091 583 aaKnown RBP23.24■■□□□ 1.31
CLN6-201ENST00000249806 FLT3P36888 993 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 PHLDB2Q86SQ0 1253 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 OR5B17Q8NGF7 314 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 CPA5Q8WXQ8 436 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 TRIM31Q9BZY9 425 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 AZI2Q9H6S1 392 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 TMEM134Q9H6X4 195 aa23.24■■□□□ 1.31
CLN6-201ENST00000249806 MCM3APO60318 1980 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 CNTNAP2Q9UHC6 1331 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 GOLGA8KD6RF30 607 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 LDHAP00338 332 aaKnown RBP23.23■■□□□ 1.31
CLN6-201ENST00000249806 PYGMP11217 842 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 UNGP13051 313 aaPredicted RBP23.23■■□□□ 1.31
CLN6-201ENST00000249806 ACTN2P35609 894 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 HSPA9P38646 679 aaKnown RBP23.23■■□□□ 1.31
CLN6-201ENST00000249806 C2CD6Q53TS8 623 aa23.23■■□□□ 1.31
CLN6-201ENST00000249806 TMEM63BQ5T3F8 832 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms