RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 KCNA5P22460 613 aa26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 NAB2Q15742 525 aa26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 EP400NLQ6ZTU2 488 aa26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 STXBP4Q6ZWJ1 553 aa26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 RBM23Q86U06 439 aaKnown RBP26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 SNX27Q96L92 541 aa26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 UROC1Q96N76 676 aa26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 PPP1R10Q96QC0 940 aaKnown RBP26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 HERC2P3Q9BVR0 1158 aa26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 PLEKHA5Q9HAU0 1116 aa26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 GTF3C5Q9Y5Q8 519 aaPredicted RBP26.59■■□□□ 1.85
SDF2L1-201ENST00000248958 SMIM28A0A1B0GU29 152 aa26.58■■□□□ 1.85
SDF2L1-201ENST00000248958 C2orf71A6NGG8 1288 aa26.58■■□□□ 1.85
SDF2L1-201ENST00000248958 CLTAP09496 248 aa26.58■■□□□ 1.85
SDF2L1-201ENST00000248958 KCNE1P15382 129 aa26.58■■□□□ 1.85
SDF2L1-201ENST00000248958 GTF2F1P35269 517 aaKnown RBP eCLIP26.58■■□□□ 1.851e-8■■■■■ 47.9
SDF2L1-201ENST00000248958 ASIC1P78348 528 aa26.58■■□□□ 1.85
SDF2L1-201ENST00000248958 HSP90AA2PQ14568 343 aaPredicted RBP26.58■■□□□ 1.85
SDF2L1-201ENST00000248958 TMEM87AQ8NBN3 555 aa26.58■■□□□ 1.85
SDF2L1-201ENST00000248958 ACCSQ96QU6 501 aa26.58■■□□□ 1.85
SDF2L1-201ENST00000248958 CNTN3Q9P232 1028 aa26.58■■□□□ 1.85
SDF2L1-201ENST00000248958 ADAM28Q9UKQ2 775 aa26.58■■□□□ 1.85
SDF2L1-201ENST00000248958 PRUNE2Q8WUY3 3088 aa26.58■■□□□ 1.85
SDF2L1-201ENST00000248958 PDCD11Q14690 1871 aaKnown RBP26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 A0A0B4J269 797 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 A0A1W2PQ27 194 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 A0A1W2PQ64 194 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 A0A1W2PQD8 194 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 HIDE1A8MVS5 230 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 OGTO15294 1046 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 EFEMP2O95967 443 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 SLFN14P0C7P3 912 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 PFKFB1P16118 471 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 CA8P35219 290 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 COASYQ13057 564 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 POSTNQ15063 836 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 L1TD1Q5T7N2 865 aaKnown RBP26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 RNF168Q8IYW5 571 aaPredicted RBP26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 CHAMP1Q96JM3 812 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 HAPLN2Q9GZV7 340 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 TBC1D7Q9P0N9 293 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 HPSEQ9Y251 543 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 STYXL1Q9Y6J8 313 aa26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 SPTBN5Q9NRC6 3674 aaKnown RBP26.57■■□□□ 1.84
SDF2L1-201ENST00000248958 FAM237AA0A1B0GTK4 181 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 A0A1B0GVL5 298 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 CASTOR2A6NHX0 329 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 PER2O15055 1255 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 TADA2AO75478 443 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 URODP06132 367 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 NDUFV1P49821 464 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 GLRA4Q5JXX5 417 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 FUT10Q6P4F1 479 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 UNC13DQ70J99 1090 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 GPR65Q8IYL9 337 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 TSPAN18Q96SJ8 248 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 MSTO1Q9BUK6 570 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 VN1R3Q9BXE9 311 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 CXCL16Q9H2A7 254 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 TMEM206Q9H813 350 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 MRPL17Q9NRX2 175 aaKnown RBP26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 FAM50BQ9Y247 325 aa26.56■■□□□ 1.84
SDF2L1-201ENST00000248958 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 PVALEFA0A1B0GWK0 134 aa26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 BMP1P13497 986 aa26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 LTBRP36941 435 aa26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 POU5F1Q01860 360 aaKnown RBP26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 ELAVL2Q12926 359 aaKnown RBP26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 SLC10A6Q3KNW5 377 aa26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 SLC39A4Q6P5W5 647 aa26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 TMEM184AQ6ZMB5 413 aa26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 CD302Q8IX05 232 aa26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 DDX27Q96GQ7 796 aaKnown RBP26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 EMILIN2Q9BXX0 1053 aa26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 SERTAD1Q9UHV2 236 aa26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 CIZ1Q9ULV3 898 aaPredicted RBP26.55■■□□□ 1.84
SDF2L1-201ENST00000248958 REV3LO60673 3130 aa26.54■■□□□ 1.84
SDF2L1-201ENST00000248958 TMEM189-UBE2V1I3L0A0 370 aa26.54■■□□□ 1.84
SDF2L1-201ENST00000248958 LINC01565O15544 149 aa26.54■■□□□ 1.84
SDF2L1-201ENST00000248958 MYL1P05976 194 aa26.54■■□□□ 1.84
SDF2L1-201ENST00000248958 SYKP43405 635 aa26.54■■□□□ 1.84
SDF2L1-201ENST00000248958 KCNQ1P51787 676 aa26.54■■□□□ 1.84
SDF2L1-201ENST00000248958 PTPN14Q15678 1187 aa26.54■■□□□ 1.84
SDF2L1-201ENST00000248958 USP41Q3LFD5 358 aa26.54■■□□□ 1.84
SDF2L1-201ENST00000248958 DCLRE1AQ6PJP8 1040 aa26.54■■□□□ 1.84
SDF2L1-201ENST00000248958 PPFIBP1Q86W92 1011 aa26.54■■□□□ 1.84
SDF2L1-201ENST00000248958 RPF1Q9H9Y2 349 aaKnown RBP26.54■■□□□ 1.84
SDF2L1-201ENST00000248958 SF3B1O75533 1304 aaKnown RBP eCLIP26.54■■□□□ 1.843e-6■■■■■ 160.8
SDF2L1-201ENST00000248958 ANKRD63C9JTQ0 380 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 ACTN4O43707 911 aaKnown RBP26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 TBX10O75333 385 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 MYBP10242 640 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 GLUD2P49448 558 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 PPP2R3AQ06190 1150 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 KCNC3Q14003 757 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 SEZ6Q53EL9 994 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 KIAA1841Q6NSI8 718 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 SYCP3Q8IZU3 236 aa26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 GADD45GIP1Q8TAE8 222 aaPredicted RBP26.53■■□□□ 1.84
SDF2L1-201ENST00000248958 CASP10Q92851 521 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms