RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 PTPN14Q15678 1187 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 CNNM4Q6P4Q7 775 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 TMEM184AQ6ZMB5 413 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 GPR65Q8IYL9 337 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 UROC1Q96N76 676 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 PPP1R10Q96QC0 940 aaKnown RBP13.97□□□□□ -0.17
VPREB3-201ENST00000248948 SLC38A7Q9NVC3 462 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 CNTN3Q9P232 1028 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 ADAM28Q9UKQ2 775 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 SSX2IPQ9Y2D8 614 aa13.97□□□□□ -0.17
VPREB3-201ENST00000248948 H3BQ06 376 aaPredicted RBP13.96□□□□□ -0.17
VPREB3-201ENST00000248948 LINC01565O15544 149 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 HARSP12081 509 aaKnown RBP13.96□□□□□ -0.17
VPREB3-201ENST00000248948 NMT1P30419 496 aaKnown RBP13.96□□□□□ -0.17
VPREB3-201ENST00000248948 AMPD3Q01432 767 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 COASYQ13057 564 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 SMAD4Q13485 552 aaKnown RBP13.96□□□□□ -0.17
VPREB3-201ENST00000248948 PTCRAQ6ISU1 281 aaPredicted RBP13.96□□□□□ -0.17
VPREB3-201ENST00000248948 FUT10Q6P4F1 479 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 ALKAL1Q6UXT8 129 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 ZBTB33Q86T24 672 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 RBM23Q86U06 439 aaKnown RBP13.96□□□□□ -0.17
VPREB3-201ENST00000248948 CCDC65Q8IXS2 484 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.96□□□□□ -0.17
VPREB3-201ENST00000248948 LEO1Q8WVC0 666 aaPredicted RBP13.96□□□□□ -0.17
VPREB3-201ENST00000248948 DHX58Q96C10 678 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 MSLNLQ96KJ4 702 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 SPATA32Q96LK8 384 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 ACAP3Q96P50 834 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 TRIM9Q9C026 710 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 SCAND2PQ9GZW5 306 aaPredicted RBP13.96□□□□□ -0.17
VPREB3-201ENST00000248948 IGFLR1Q9H665 355 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 MRPL44Q9H9J2 332 aaKnown RBP13.96□□□□□ -0.17
VPREB3-201ENST00000248948 CD207Q9UJ71 328 aa13.96□□□□□ -0.17
VPREB3-201ENST00000248948 C2orf16Q68DN1 1984 aa13.96□□□□□ -0.18
VPREB3-201ENST00000248948 CASTOR2A6NHX0 329 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 FAM189A1O60320 539 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 KIF4AO95239 1232 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 CLTAP09496 248 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 IDEP14735 1019 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 KCNE1P15382 129 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 MATR3P43243 847 aaKnown RBP eCLIP13.95□□□□□ -0.18
VPREB3-201ENST00000248948 GLUD2P49448 558 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 NUCB2P80303 420 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 CREMQ03060 361 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 DLX2Q07687 328 aaPredicted RBP13.95□□□□□ -0.18
VPREB3-201ENST00000248948 GLRA4Q5JXX5 417 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 EP400NLQ6ZTU2 488 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 ZNF720Q7Z2F6 126 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 PPFIBP1Q86W92 1011 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 SMRP1Q8NCR6 262 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 VN1R2Q8NFZ6 395 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 CASP10Q92851 521 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 UHRF1Q96T88 793 aaPredicted RBP13.95□□□□□ -0.18
VPREB3-201ENST00000248948 STRA6Q9BX79 667 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 EMILIN2Q9BXX0 1053 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 PLEKHA5Q9HAU0 1116 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 MRPL17Q9NRX2 175 aaKnown RBP13.95□□□□□ -0.18
VPREB3-201ENST00000248948 CLEC1BQ9P126 229 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 EXOC7Q9UPT5 735 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 HCFC2Q9Y5Z7 792 aa13.95□□□□□ -0.18
VPREB3-201ENST00000248948 A0A0B4J269 797 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 SMIM28A0A1B0GU29 152 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 GRXCR2A6NFK2 248 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 DLL1O00548 723 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 PER2O15055 1255 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 OGTO15294 1046 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 POLR2DO15514 142 aaKnown RBP13.94□□□□□ -0.18
VPREB3-201ENST00000248948 CA8P35219 290 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 OSTNP61366 133 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 DSG1Q02413 1049 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 PPP2R3AQ06190 1150 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 ELAVL2Q12926 359 aaKnown RBP13.94□□□□□ -0.18
VPREB3-201ENST00000248948 ZC2HC1CQ53FD0 456 aaPredicted RBP13.94□□□□□ -0.18
VPREB3-201ENST00000248948 L1TD1Q5T7N2 865 aaKnown RBP13.94□□□□□ -0.18
VPREB3-201ENST00000248948 ADALQ6DHV7 355 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 SLFN12LQ6IEE8 588 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 SLC39A4Q6P5W5 647 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 STXBP4Q6ZWJ1 553 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 ZBTB45Q96K62 511 aaPredicted RBP13.94□□□□□ -0.18
VPREB3-201ENST00000248948 TSPAN18Q96SJ8 248 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 PAAF1Q9BRP4 392 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 PANK2Q9BZ23 570 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 HAPLN2Q9GZV7 340 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 CXCL16Q9H2A7 254 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.94□□□□□ -0.18
VPREB3-201ENST00000248948 CHST7Q9NS84 486 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 PANK4Q9NVE7 773 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 DZANK1Q9NVP4 752 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 USP25Q9UHP3 1055 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 KCNH3Q9ULD8 1083 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 BARX2Q9UMQ3 279 aaPredicted RBP13.94□□□□□ -0.18
VPREB3-201ENST00000248948 STYXL1Q9Y6J8 313 aa13.94□□□□□ -0.18
VPREB3-201ENST00000248948 UBE4BO95155 1302 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 F8W810 466 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 MBTPS2O43462 519 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 LILRB3O75022 631 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 CLASP2O75122 1294 aaKnown RBP13.93□□□□□ -0.18
VPREB3-201ENST00000248948 GCNT3O95395 438 aa13.93□□□□□ -0.18
VPREB3-201ENST00000248948 CXCL14O95715 111 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms