RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 CCDC26Q8TAB7 109 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 SLC7A3Q8WY07 619 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 C1orf112Q9NSG2 853 aa16.92■□□□□ 0.3
LRFN1-201ENST00000248668 CCDC188H7C350 402 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 MAPK13O15264 365 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 PIK3CAP42336 1068 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 ALDH5A1P51649 535 aaPredicted RBP16.91■□□□□ 0.3
LRFN1-201ENST00000248668 IQCKQ8N0W5 287 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 NF2P35240 595 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 PPFIA1Q13136 1202 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 TTLL12Q14166 644 aaPredicted RBP16.91■□□□□ 0.3
LRFN1-201ENST00000248668 WHAMMQ8TF30 809 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 FBXL18Q96ME1 805 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 SH3GL2Q99962 352 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 BCCIPQ9P287 314 aaKnown RBP eCLIP16.91■□□□□ 0.3
LRFN1-201ENST00000248668 CNOT8Q9UFF9 292 aaKnown RBP16.91■□□□□ 0.3
LRFN1-201ENST00000248668 PTPN22Q9Y2R2 807 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 UTP11Q9Y3A2 253 aaKnown RBP16.91■□□□□ 0.3
LRFN1-201ENST00000248668 NFASCO94856 1347 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 LTBP3Q9NS15 1303 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 PARP14Q460N5 1801 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 HLA-DRAP01903 254 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 CFHP08603 1231 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 PYGMP11217 842 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 HSD17B3P37058 310 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 SNRPFP62306 86 aaKnown RBP16.91■□□□□ 0.3
LRFN1-201ENST00000248668 TDRD10Q5VZ19 366 aaKnown RBP16.91■□□□□ 0.3
LRFN1-201ENST00000248668 CARD9Q9H257 536 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 SNX24Q9Y343 169 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 CSADQ9Y600 493 aa16.91■□□□□ 0.3
LRFN1-201ENST00000248668 WDR81Q562E7 1941 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 HPDP32754 393 aaPredicted RBP16.9■□□□□ 0.3
LRFN1-201ENST00000248668 MAGEA9P43362 315 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 DR1Q01658 176 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 CDR2Q01850 454 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 PDCLQ13371 301 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 TMC2Q8TDI7 906 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 HVCN1Q96D96 273 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 TCHPQ9BT92 498 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 MSTO1Q9BUK6 570 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 C17orf75Q9HAS0 396 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 COQ4Q9Y3A0 265 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 BRCA1P38398 1863 aaKnown RBP16.9■□□□□ 0.3
LRFN1-201ENST00000248668 SOWAHBA6NEL2 793 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 GOLGA8KD6RF30 607 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 GGPS1O95749 300 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 SRGAP2CP0DJJ0 459 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 UAP1Q16222 522 aaPredicted RBP16.9■□□□□ 0.3
LRFN1-201ENST00000248668 CDR2LQ86X02 465 aaPredicted RBP16.9■□□□□ 0.3
LRFN1-201ENST00000248668 ZDHHC14Q8IZN3 488 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 LRRC71Q8N4P6 559 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 UBL4BQ8N7F7 174 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 PCYT2Q99447 389 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 SGIP1Q9BQI5 828 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 ZSWIM1Q9BR11 485 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 RBAKQ9NYW8 714 aaPredicted RBP16.9■□□□□ 0.3
LRFN1-201ENST00000248668 UMODL1Q5DID0 1318 aa16.9■□□□□ 0.3
LRFN1-201ENST00000248668 ATP2A1O14983 1001 aa16.89■□□□□ 0.3
LRFN1-201ENST00000248668 CTNNA1P35221 906 aaKnown RBP16.89■□□□□ 0.3
LRFN1-201ENST00000248668 KCNJ1P48048 391 aa16.89■□□□□ 0.3
LRFN1-201ENST00000248668 GNGT1P63211 74 aa16.89■□□□□ 0.3
LRFN1-201ENST00000248668 USP37Q86T82 979 aa16.89■□□□□ 0.3
LRFN1-201ENST00000248668 GPC2Q8N158 579 aa16.89■□□□□ 0.3
LRFN1-201ENST00000248668 GOLGA6L10A0A0M3HER8 536 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 EXTL3O43909 919 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 ZEB2O60315 1214 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 GARTP22102 1010 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 GJC1P36383 396 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 CENPFP49454 3210 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 TMEM63BQ5T3F8 832 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 LBX2Q6XYB7 198 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 MAGOHBQ96A72 148 aaKnown RBP16.89■□□□□ 0.29
LRFN1-201ENST00000248668 GSTTP1A0A1W2PQM5 241 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 TCF7P36402 384 aaPredicted RBP16.89■□□□□ 0.29
LRFN1-201ENST00000248668 DHX9Q08211 1270 aaKnown RBP16.89■□□□□ 0.29
LRFN1-201ENST00000248668 WDR44Q5JSH3 913 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 OR5B17Q8NGF7 314 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 DDX1Q92499 740 aaKnown RBP16.89■□□□□ 0.29
LRFN1-201ENST00000248668 CAPS2Q9BXY5 557 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 SPATC1LQ9H0A9 340 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 PORCNQ9H237 461 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 SLITRK6Q9H5Y7 841 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 LRRC4CQ9HCJ2 640 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 ANAPC7Q9UJX3 599 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 ATP8A1Q9Y2Q0 1164 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 MAFBQ9Y5Q3 323 aaPredicted RBP16.89■□□□□ 0.29
LRFN1-201ENST00000248668 ATP8B3O60423 1300 aa16.89■□□□□ 0.29
LRFN1-201ENST00000248668 GJB1P08034 283 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 PLTPP55058 493 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 CUL1Q13616 776 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 SULF1Q8IWU6 871 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 FARP2O94887 1054 aaPredicted RBP16.88■□□□□ 0.29
LRFN1-201ENST00000248668 GJB6O95452 261 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 TNFSF9P41273 254 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 STAT5BP51692 787 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 TMEM270Q6UE05 265 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 CRELD2Q6UXH1 353 aaPredicted RBP16.88■□□□□ 0.29
LRFN1-201ENST00000248668 TMEM174Q8WUU8 243 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 TRAPPC12Q8WVT3 735 aa16.88■□□□□ 0.29
LRFN1-201ENST00000248668 PSPC1Q8WXF1 523 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms