RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 NAP1L1P55209 391 aaKnown RBP25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 MFSD14CQ5VZR4 134 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 U2AF1L4Q8WU68 220 aaKnown RBP25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 LMBR1Q8WVP7 490 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 ZNF516Q92618 1163 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 MINDY3Q9H8M7 445 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 ANKZF1Q9H8Y5 726 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 ZNF446Q9NWS9 450 aa25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 AGO2Q9UKV8 859 aaKnown RBP25.22■■□□□ 1.63
SYNGR3-201ENST00000248121 COL1A2P08123 1366 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 CSDE1O75534 798 aaKnown RBP25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 ACOT2P49753 483 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 ZBTB41Q5SVQ8 909 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 COG1Q8WTW3 980 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 PGK1P00558 417 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 SMIM10L2AP0DMW4 78 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 SMIM10L2BP0DMW5 78 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 PRLRP16471 622 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 CLDN10P78369 228 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 MXD4Q14582 209 aaPredicted RBP25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 FSCN1Q16658 493 aaKnown RBP25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 NFRKBQ6P4R8 1299 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 C15orf39Q6ZRI6 1047 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 PALB2Q86YC2 1186 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 CREG2Q8IUH2 290 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 FBXL13Q8NEE6 735 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 HELQQ8TDG4 1101 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 ELMO3Q96BJ8 720 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 PARD6BQ9BYG5 372 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 AP5M1Q9H0R1 490 aa25.21■■□□□ 1.63
SYNGR3-201ENST00000248121 A0A0B4J269 797 aa25.2■■□□□ 1.62
SYNGR3-201ENST00000248121 GRID2IPA4D2P6 1211 aa25.2■■□□□ 1.62
SYNGR3-201ENST00000248121 GPR25O00155 361 aa25.2■■□□□ 1.62
SYNGR3-201ENST00000248121 MSCO60682 206 aa25.2■■□□□ 1.62
SYNGR3-201ENST00000248121 C6orf222P0C671 652 aaPredicted RBP25.2■■□□□ 1.62
SYNGR3-201ENST00000248121 IQCF3P0C7M6 154 aa25.2■■□□□ 1.62
SYNGR3-201ENST00000248121 MFSD10Q14728 455 aa25.2■■□□□ 1.62
SYNGR3-201ENST00000248121 FMNL3Q8IVF7 1028 aa25.2■■□□□ 1.62
SYNGR3-201ENST00000248121 KIAA1586Q9HCI6 787 aa25.2■■□□□ 1.62
SYNGR3-201ENST00000248121 RAB20Q9NX57 234 aa25.2■■□□□ 1.62
SYNGR3-201ENST00000248121 SRRDQ9UH36 339 aa25.2■■□□□ 1.62
SYNGR3-201ENST00000248121 CPT1AP50416 773 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 PSMD6Q15008 389 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 SLC20A1Q8WUM9 679 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 OSBPL9Q96SU4 736 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 JPH2Q9BR39 696 aaPredicted RBP25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 ANKFY1Q9P2R3 1169 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 AKT3Q9Y243 479 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 Q9Y3F1 56 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 DUSP11O75319 330 aaKnown RBP25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 CCDC172P0C7W6 258 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 SLFN12LQ6IEE8 588 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 USP37Q86T82 979 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 EXOC8Q8IYI6 725 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 PPM1KQ8N3J5 372 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 VTI1AQ96AJ9 217 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 IFT122Q9HBG6 1241 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 TSKSQ9UJT2 592 aa25.19■■□□□ 1.62
SYNGR3-201ENST00000248121 PTPRJQ12913 1337 aa25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 HAS3O00219 553 aa25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 KIAA0391O15091 583 aaKnown RBP25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 B4GALT5O43286 388 aa25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 H2AFZP0C0S5 128 aa25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 PRKAR2AP13861 404 aaKnown RBP25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 PSEN2P49810 448 aa25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 ZNF200P98182 395 aaPredicted RBP25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 PRPF4BQ13523 1007 aaKnown RBP25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 LMBRD2Q68DH5 695 aaPredicted RBP25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 H2AFVQ71UI9 128 aa25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 FAM71AQ8IYT1 594 aa25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 ARID3AQ99856 593 aa25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 INTUQ9ULD6 942 aa25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 CEP350Q5VT06 3117 aa25.18■■□□□ 1.62
SYNGR3-201ENST00000248121 A0A087WZ62 844 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 FTCDO95954 541 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 GALCP54803 685 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 PURAQ00577 322 aaKnown RBP25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 SEZ6Q53EL9 994 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 MSANTD4Q8NCY6 345 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 SHC3Q92529 594 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 PSMB7Q99436 277 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 AGPAT1Q99943 283 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 FDXACB1Q9BRP7 624 aaPredicted RBP25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 MSTO1Q9BUK6 570 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 PDE11AQ9HCR9 933 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 TAS2R14Q9NYV8 317 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 HYOU1Q9Y4L1 999 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 SCN10AQ9Y5Y9 1956 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 MAGEB2O15479 319 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 PRKCBP05771 671 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 CXCR5P32302 372 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 MBTD1Q05BQ5 628 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 CDR2LQ86X02 465 aaPredicted RBP25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 TATDN2Q93075 761 aa25.17■■□□□ 1.62
SYNGR3-201ENST00000248121 HARSP12081 509 aaKnown RBP25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 PTENP60484 403 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 TMEM62Q0P6H9 643 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 RUFY4Q6ZNE9 571 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 KIAA0319LQ8IZA0 1049 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 PNKPQ96T60 521 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms