RNA–Protein interactions for RNA: ENST00000245441.9

NIN-201, Transcript of ninein, humanhuman

APPRIS P5 TSL 5 BASIC

Gene NIN, Length 10,293 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIN-201ENST00000245441 KDM4CQ9H3R0 1056 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 PPLO60437 1756 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 PSMD14O00487 310 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 APRTP07741 180 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 ARPP19P56211 112 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 NBPF20Q3BBV1 942 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 TSSK1BQ9BXA7 367 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 CD209Q9NNX6 404 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 BATF3Q9NR55 127 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 AGBL2Q5U5Z8 902 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 DACH2Q96NX9 599 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 CHP1Q99653 195 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 RHOBTB3O94955 611 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 FMO5P49326 533 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 HAUS6Q7Z4H7 955 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 OR6P1Q8NGX9 317 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 TDP2O95551 362 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 KLC1Q07866 573 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 MS4A14Q96JA4 679 aa12.1□□□□□ -0.47
NIN-201ENST00000245441 DHX35Q9H5Z1 703 aaKnown RBP12.1□□□□□ -0.47
NIN-201ENST00000245441 ZNF185O15231 689 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 SCP2P22307 547 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 PIGHQ14442 188 aaPredicted RBP12.09□□□□□ -0.47
NIN-201ENST00000245441 MXD4Q14582 209 aaPredicted RBP12.09□□□□□ -0.47
NIN-201ENST00000245441 DNAL1Q4LDG9 190 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 AGGF1Q8N302 714 aaeCLIP12.09□□□□□ -0.47
NIN-201ENST00000245441 PDCD6IPQ8WUM4 868 aaKnown RBP12.09□□□□□ -0.47
NIN-201ENST00000245441 SP110Q9HB58 689 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 TMEM260Q9NX78 707 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 CACNB3P54284 484 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 RAPGEF5Q92565 580 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 EPC1Q9H2F5 836 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 QTRT2Q9H974 415 aaKnown RBP12.09□□□□□ -0.47
NIN-201ENST00000245441 F5H6K3 240 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 MMP10P09238 476 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 HSD17B4P51659 736 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 EIF3EP60228 445 aaKnown RBP12.09□□□□□ -0.47
NIN-201ENST00000245441 KLRC3Q07444 240 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 ANKRD7Q92527 254 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 PCDHA10Q9Y5I2 948 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 A0A1W2PQJ5 194 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 ITIH2P19823 946 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 UCHL3P15374 230 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 SPAG6O75602 509 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 TRIM28Q13263 835 aaKnown RBP12.09□□□□□ -0.47
NIN-201ENST00000245441 RABGAP1LQ5R372 815 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 PBXIP1Q96AQ6 731 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 C18orf8Q96DM3 657 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 ANGPT2O15123 496 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 TRPM8Q7Z2W7 1104 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 RIBC1Q8N443 379 aaPredicted RBP12.09□□□□□ -0.47
NIN-201ENST00000245441 TRIM54Q9BYV2 358 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 IRAK4Q9NWZ3 460 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 FOXN1O15353 648 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 CHN1P15882 459 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 KRT27Q7Z3Y8 459 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 ADSSL1Q8N142 457 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 NEDD1Q8NHV4 660 aa12.09□□□□□ -0.47
NIN-201ENST00000245441 COPB2P35606 906 aa12.08□□□□□ -0.47
NIN-201ENST00000245441 CMTM5Q96DZ9 223 aa12.08□□□□□ -0.47
NIN-201ENST00000245441 GPBP1L1Q9HC44 474 aaPredicted RBP12.08□□□□□ -0.47
NIN-201ENST00000245441 NPHS2Q9NP85 383 aa12.08□□□□□ -0.47
NIN-201ENST00000245441 PSD3Q9NYI0 1048 aa12.08□□□□□ -0.47
NIN-201ENST00000245441 KCNN4O15554 427 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 UGP2Q16851 508 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 ELOA2Q8IYF1 753 aaPredicted RBP12.08□□□□□ -0.48
NIN-201ENST00000245441 SCFD1Q8WVM8 642 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 MRPL1Q9BYD6 325 aaKnown RBP12.08□□□□□ -0.48
NIN-201ENST00000245441 TRIM45Q9H8W5 580 aaPredicted RBP12.08□□□□□ -0.48
NIN-201ENST00000245441 COG4Q9H9E3 785 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 RNF146Q9NTX7 359 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 CHCHD3Q9NX63 227 aaKnown RBP12.08□□□□□ -0.48
NIN-201ENST00000245441 WDR35Q9P2L0 1181 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 KDM6AO15550 1401 aaPredicted RBP12.08□□□□□ -0.48
NIN-201ENST00000245441 TNS3Q68CZ2 1445 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 DDX5P17844 614 aaKnown RBP12.08□□□□□ -0.48
NIN-201ENST00000245441 ACTR2P61160 394 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 KCNA1Q09470 495 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 INPP5AQ14642 412 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 C1orf228Q6PIY5 440 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 SH3GL3Q99963 347 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 PHF20Q9BVI0 1012 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 PLA2G12BQ9BX93 195 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 STOX1Q6ZVD7 989 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 PGBD4Q96DM1 585 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 PPP1R2P1Q96PQ5 205 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 NEK2P51955 445 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 NAB2Q15742 525 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 LRRC8EQ6NSJ5 796 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 OTUB1Q96FW1 271 aaPredicted RBP12.08□□□□□ -0.48
NIN-201ENST00000245441 FAM167BQ9BTA0 163 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 CCDC90BQ9GZT6 254 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 RPS6KA4O75676 772 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 FOXO4P98177 505 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 KDSRQ06136 332 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 RABL6Q3YEC7 729 aaPredicted RBP12.08□□□□□ -0.48
NIN-201ENST00000245441 KCNV1Q6PIU1 500 aa12.08□□□□□ -0.48
NIN-201ENST00000245441 SRBD1Q8N5C6 995 aaKnown RBP12.08□□□□□ -0.48
NIN-201ENST00000245441 ABCF3Q9NUQ8 709 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms