RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 RBM15Q96T37 977 aaKnown RBP eCLIP7.94□□□□□ -1.146e-8■■□□□ 12
RIF1-201ENST00000243326 GRID2IPA4D2P6 1211 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 ATP9AO75110 1047 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 DNAJC8O75937 253 aaPredicted RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 ADSLP30566 484 aaPredicted RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 KIZQ2M2Z5 673 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 TCHHL1Q5QJ38 904 aaPredicted RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 ELMO2Q96JJ3 720 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 LACRTQ9GZZ8 138 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 GLT8D2Q9H1C3 349 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 COG4Q9H9E3 785 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 CACYBPQ9HB71 228 aaKnown RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 GPATCH2LQ9NWQ4 482 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 SYF2O95926 243 aaKnown RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 ABCG1P45844 678 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 ASPRV1Q53RT3 343 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 GABBR1Q9UBS5 961 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 APPL1Q9UKG1 709 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 ETS2P15036 469 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 MORF4L2Q15014 288 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 PRDM15P57071 1507 aaPredicted RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 DLGAP3O95886 979 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 COPS2P61201 443 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 PRUNE1Q86TP1 453 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 TTC30AQ86WT1 665 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 SEMA4DQ92854 862 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 FAM217BQ9NTX9 383 aaPredicted RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 SAMD9LQ8IVG5 1584 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 TSPOAP1O95153 1857 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 GSSP48637 474 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 VAMP7P51809 220 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 TBL3Q12788 808 aaKnown RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 IMPG1Q17R60 797 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 KNOP1Q1ED39 458 aaKnown RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 SNRNP48Q6IEG0 339 aaKnown RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 UBA3Q8TBC4 463 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 LRRN4Q8WUT4 740 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 USP6NLQ92738 828 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 DMGDHQ9UI17 866 aaKnown RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 A0A1B0GTH6 734 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 ACOT2P49753 483 aa7.94□□□□□ -1.14
RIF1-201ENST00000243326 TMED10P49755 219 aaKnown RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.94□□□□□ -1.14
RIF1-201ENST00000243326 KCNMA1Q12791 1236 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 LBRQ14739 615 aaKnown RBP7.93□□□□□ -1.14
RIF1-201ENST00000243326 RHOT2Q8IXI1 618 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 LRRC4Q9HBW1 653 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 MRPL47Q9HD33 250 aaKnown RBP7.93□□□□□ -1.14
RIF1-201ENST00000243326 STK24Q9Y6E0 443 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 ITGA4P13612 1032 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 COMTP21964 271 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 KLRC1P26715 233 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 RFC5P40937 340 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 CCDC15Q0P6D6 951 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 PGBD4Q96DM1 585 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 HAUS8Q9BT25 410 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 TUBB6Q9BUF5 446 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 BABAM1Q9NWV8 329 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 DISP1Q96F81 1524 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 TMEM62Q0P6H9 643 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 TMCO5AQ8N6Q1 288 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 CCT7Q99832 543 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 A8MUI8 341 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 GLRBP48167 497 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 WDR75Q8IWA0 830 aaKnown RBP7.93□□□□□ -1.14
RIF1-201ENST00000243326 EIF2AK1Q9BQI3 630 aaKnown RBP7.93□□□□□ -1.14
RIF1-201ENST00000243326 ROBO2Q9HCK4 1378 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 RSPH10B2B2RC85 870 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 RSPH10BP0C881 870 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 PTK7Q13308 1070 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 ZNF786Q8N393 782 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 PALM3A6NDB9 673 aaPredicted RBP7.93□□□□□ -1.14
RIF1-201ENST00000243326 ZNF233A6NK53 670 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 PLA2G4FQ68DD2 849 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 PIGBQ92521 554 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 MARK4Q96L34 752 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 VCPKMTQ9H867 229 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 HEY2Q9UBP5 337 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 LAD1O00515 517 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 ESRRBO95718 433 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 SRGNP10124 158 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 BPIFB4P59827 614 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 DRP2Q13474 957 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 BMPR2Q13873 1038 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 PDZD4Q76G19 769 aaPredicted RBP7.93□□□□□ -1.14
RIF1-201ENST00000243326 SAPCD2Q86UD0 394 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 NIM1KQ8IY84 436 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 PODXLO00592 558 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 HMBSP08397 361 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 FAM160B1Q5W0V3 765 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 MIS18BP1Q6P0N0 1132 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 PADI6Q6TGC4 694 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 RNF148Q8N7C7 305 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 PITPNM2Q9BZ72 1349 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 POLRMTO00411 1230 aaKnown RBP7.93□□□□□ -1.14
RIF1-201ENST00000243326 PIAS1O75925 651 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 ADSSL1Q8N142 457 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 USP20Q9Y2K6 914 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 AP3B1O00203 1094 aa7.93□□□□□ -1.14
RIF1-201ENST00000243326 PEX1O43933 1283 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms