RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 GBA2Q9HCG7 927 aaPredicted RBP19.9■□□□□ 0.78
HOXC11-201ENST00000243082 DMGDHQ9UI17 866 aaKnown RBP19.9■□□□□ 0.78
HOXC11-201ENST00000243082 TRPC6Q9Y210 931 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 CLDN3O15551 220 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 TOM1L1O75674 476 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 GCLCP48506 637 aaPredicted RBP19.9■□□□□ 0.78
HOXC11-201ENST00000243082 HADHBP55084 474 aaKnown RBP19.9■□□□□ 0.78
HOXC11-201ENST00000243082 TCEAL1Q15170 157 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 CCDC70Q6NSX1 233 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 CCNI2Q6ZMN8 369 aaPredicted RBP19.9■□□□□ 0.78
HOXC11-201ENST00000243082 HDXQ7Z353 690 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 METTL13Q8N6R0 699 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 CGRRF1Q99675 332 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 C1orf112Q9NSG2 853 aa19.9■□□□□ 0.78
HOXC11-201ENST00000243082 RBM47A0AV96 593 aaKnown RBP19.89■□□□□ 0.77
HOXC11-201ENST00000243082 STRNO43815 780 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 RNASE9P60153 205 aaKnown RBP19.89■□□□□ 0.77
HOXC11-201ENST00000243082 MRPS25P82663 173 aaKnown RBP19.89■□□□□ 0.77
HOXC11-201ENST00000243082 CDR2Q01850 454 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 LAMC2Q13753 1193 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 RHOT2Q8IXI1 618 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 USP38Q8NB14 1042 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 ZBTB10Q96DT7 871 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 FAM81BQ96LP2 452 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 JPH2Q9BR39 696 aaPredicted RBP19.89■□□□□ 0.77
HOXC11-201ENST00000243082 KATNBL1Q9H079 304 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 VTA1Q9NP79 307 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 AMFRQ9UKV5 643 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 PLXNA1Q9UIW2 1896 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 PLXNB2O15031 1838 aa19.89■□□□□ 0.77
HOXC11-201ENST00000243082 ABLIM1O14639 778 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 PRKCBP05771 671 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 MYBL2P10244 700 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 HARSP12081 509 aaKnown RBP19.88■□□□□ 0.77
HOXC11-201ENST00000243082 PIK3CAP42336 1068 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 PDE6CP51160 858 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 GPC5P78333 572 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 BIRC3Q13489 604 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 WDR44Q5JSH3 913 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 RHPN2Q8IUC4 686 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 ZBTB8OSQ8IWT0 167 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 OR5B17Q8NGF7 314 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 ACTRT1Q8TDG2 376 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 ERAP1Q9NZ08 941 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 TMEM59LQ9UK28 342 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 GJB1P08034 283 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 TNFSF9P41273 254 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 MAPK6Q16659 721 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 SPOPLQ6IQ16 392 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 EFCAB12Q6NXP0 572 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 ZNF467Q7Z7K2 595 aaPredicted RBP19.88■□□□□ 0.77
HOXC11-201ENST00000243082 ZBTB33Q86T24 672 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 BRSK2Q8IWQ3 736 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 RUBCNQ92622 972 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 HINFPQ9BQA5 517 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 C2orf40Q9H1Z8 148 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 ST7Q9NRC1 585 aa19.88■□□□□ 0.77
HOXC11-201ENST00000243082 GH1P01241 217 aa19.87■□□□□ 0.77
HOXC11-201ENST00000243082 KRT5P13647 590 aa19.87■□□□□ 0.77
HOXC11-201ENST00000243082 SLC7A5Q01650 507 aa19.87■□□□□ 0.77
HOXC11-201ENST00000243082 GLE1Q53GS7 698 aaKnown RBP19.87■□□□□ 0.77
HOXC11-201ENST00000243082 SPRYD7Q5W111 196 aa19.87■□□□□ 0.77
HOXC11-201ENST00000243082 PTPN18Q99952 460 aa19.87■□□□□ 0.77
HOXC11-201ENST00000243082 SELENOOQ9BVL4 669 aa19.87■□□□□ 0.77
HOXC11-201ENST00000243082 APOBEC3GQ9HC16 384 aaKnown RBP19.87■□□□□ 0.77
HOXC11-201ENST00000243082 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.87■□□□□ 0.77
HOXC11-201ENST00000243082 IVNS1ABPQ9Y6Y0 642 aa19.87■□□□□ 0.77
HOXC11-201ENST00000243082 CEP104O60308 925 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 C22orf31O95567 290 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 SNAI1O95863 264 aaPredicted RBP19.86■□□□□ 0.77
HOXC11-201ENST00000243082 LGALS2P05162 132 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 CLCN3P51790 818 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 MCL1Q07820 350 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 CASP8Q14790 479 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 C8orf74Q6P047 294 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 GPR142Q7Z601 462 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 RASGEF1CQ8N431 466 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 ZNF668Q96K58 619 aaPredicted RBP19.86■□□□□ 0.77
HOXC11-201ENST00000243082 TCHPQ9BT92 498 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 FZD8Q9H461 694 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 CTTNBP2NLQ9P2B4 639 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 DDX3YO15523 660 aaKnown RBP19.86■□□□□ 0.77
HOXC11-201ENST00000243082 CALCAP01258 141 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 ADCYAP1R1P41586 468 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 MAP9Q49MG5 647 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 SCARA3Q6AZY7 606 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 MSL3Q8N5Y2 521 aaKnown RBP19.86■□□□□ 0.77
HOXC11-201ENST00000243082 PPTC7Q8NI37 304 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 EMID1Q96A84 441 aaPredicted RBP19.86■□□□□ 0.77
HOXC11-201ENST00000243082 CALR3Q96L12 384 aaKnown RBP19.86■□□□□ 0.77
HOXC11-201ENST00000243082 STIM2Q9P246 746 aa19.86■□□□□ 0.77
HOXC11-201ENST00000243082 OGTO15294 1046 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 CELF2O95319 508 aaKnown RBP19.85■□□□□ 0.77
HOXC11-201ENST00000243082 INSRRP14616 1297 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 ACO1P21399 889 aaKnown RBP19.85■□□□□ 0.77
HOXC11-201ENST00000243082 PROZP22891 400 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 TFDP1Q14186 410 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 SMC1AQ14683 1233 aaKnown RBP19.85■□□□□ 0.77
HOXC11-201ENST00000243082 ZNF484Q5JVG2 852 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 GSPT2Q8IYD1 628 aaKnown RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms