RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 REEP2Q9BRK0 252 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 AP1M1Q9BXS5 423 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 ISCUQ9H1K1 167 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 DAAM1Q9Y4D1 1078 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 PITPNM2Q9BZ72 1349 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 GOLGA8SH3BPF8 625 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 FESP07332 822 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 GSTA2P09210 222 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 RIPK1Q13546 671 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 C11orf91Q3C1V1 193 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 GNASQ5JWF2 1037 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 NT5DC1Q5TFE4 455 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 SCARA5Q6ZMJ2 495 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 FAM83AQ86UY5 434 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 RHOT2Q8IXI1 618 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 RSAD2Q8WXG1 361 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 VPS33BQ9H267 617 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 FBXO28Q9NVF7 368 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 EHD2Q9NZN4 543 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 ARL2BPQ9Y2Y0 163 aa11.67□□□□□ -0.54
COPA-201ENST00000241704 PPP1R3GB7ZBB8 358 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 RASGRF2O14827 1237 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 MED7O43513 233 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 ADCY8P40145 1251 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 CCDC62Q6P9F0 684 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 POLR3FQ9H1D9 316 aaPredicted RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 GAKO14976 1311 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 RGPD8O14715 1765 aaPredicted RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 IRF6O14896 467 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 SLC37A4O43826 429 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 COL9A3Q14050 684 aaPredicted RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 RCN2Q14257 317 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 XKR3Q5GH77 459 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 SPATA21Q7Z572 469 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 TRIM74Q86UV6 250 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 TRIM73Q86UV7 250 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 CREG2Q8IUH2 290 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 ST13P4Q8IZP2 240 aaPredicted RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 THEM5Q8N1Q8 247 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 PRMT1Q99873 361 aaKnown RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 FAM213AQ9BRX8 229 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 CHD2O14647 1828 aaKnown RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 DNM1LO00429 736 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 SART1O43290 800 aaKnown RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 SH3BP5O60239 455 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 DGAT1O75907 488 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 RTN3O95197 1032 aaPredicted RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 ICAM1P05362 532 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 HSPA6P17066 643 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 HSPA9P38646 679 aaKnown RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 SLCO1A2P46721 670 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 GCLCP48506 637 aaPredicted RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 SARSP49591 514 aaKnown RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 PLTPP55058 493 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 TMED1Q13445 227 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 EDRF1Q3B7T1 1238 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 C4orf50Q6ZRC1 276 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 GLT1D1Q96MS3 346 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 FAM129AQ9BZQ8 928 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 DDX4Q9NQI0 724 aaKnown RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 CPSF3Q9UKF6 684 aaKnown RBP11.66□□□□□ -0.54
COPA-201ENST00000241704 DUSP10Q9Y6W6 482 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 ABCC6O95255 1503 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 RAD51CO43502 376 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 GLI1P08151 1106 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 BMP6P22004 513 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 CYFIP1Q7L576 1253 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 SCFD2Q8WU76 684 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 CCT6BQ92526 530 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 GORASP1Q9BQQ3 440 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 MRIQ9BWK5 157 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 AGPAT5Q9NUQ2 364 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 C2CD2Q9Y426 696 aa11.66□□□□□ -0.54
COPA-201ENST00000241704 FAM237AA0A1B0GTK4 181 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 EME2A4GXA9 379 aaPredicted RBP11.65□□□□□ -0.54
COPA-201ENST00000241704 ASAP2O43150 1006 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 GH1P01241 217 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 MYBL1P10243 752 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
COPA-201ENST00000241704 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.65□□□□□ -0.54
COPA-201ENST00000241704 KRT39Q6A163 491 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 LRRC34Q8IZ02 419 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 MDM1Q8TC05 714 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 SEPT1Q8WYJ6 367 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 PPP2R3CQ969Q6 453 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 HEXIM2Q96MH2 286 aaKnown RBP11.65□□□□□ -0.54
COPA-201ENST00000241704 POLR3CQ9BUI4 534 aaPredicted RBP11.65□□□□□ -0.54
COPA-201ENST00000241704 KATNAL1Q9BW62 490 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 IFT122Q9HBG6 1241 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 PAIP2BQ9ULR5 123 aaKnown RBP11.65□□□□□ -0.54
COPA-201ENST00000241704 PASKQ96RG2 1323 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 SLC16A3O15427 465 aaKnown RBP11.65□□□□□ -0.54
COPA-201ENST00000241704 FAM153BP0C7A2 387 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 KCNA3P22001 575 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 IL9RQ01113 521 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 BLMHQ13867 455 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 FAM153CQ494X1 144 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 CRY2Q49AN0 593 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 ARHGEF18Q6ZSZ5 1173 aa11.65□□□□□ -0.54
COPA-201ENST00000241704 RYBPQ8N488 228 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms