RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 COBLL1Q53SF7 1204 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 HSP90AA4PQ58FG1 418 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 TCP11X2Q5H9J9 407 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 KSR1Q8IVT5 923 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 ADSSL1Q8N142 457 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 NELFBQ8WX92 580 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 CCDC47Q96A33 483 aaKnown RBP8.73□□□□□ -1.01
CXCR4-201ENST00000241393 TCTN2Q96GX1 697 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 TMEM47Q9BQJ4 181 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 DHRS4Q9BTZ2 278 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 NKX2-4Q9H2Z4 354 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 THAP9Q9H5L6 903 aa8.73□□□□□ -1.01
CXCR4-201ENST00000241393 SNED1Q8TER0 1413 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 TRBV23OR9-2A0A075B6M9 112 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 KCNJ18B7U540 433 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 PSMA7O14818 248 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 PRODHO43272 600 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 CYTH3O43739 400 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 KIF5CO60282 957 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 COBLO75128 1261 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 BBOX1O75936 387 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 GYPCP04921 128 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 SNRPB2P08579 225 aaKnown RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 PABPC1P11940 636 aaKnown RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 VEGFAP15692 232 aaPredicted RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 CASP1P29466 404 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 KCNJ12Q14500 433 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 RNF187Q5TA31 235 aaPredicted RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 JAKMIP3Q5VZ66 844 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 PLD6Q8N2A8 252 aaKnown RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 TGFBRAP1Q8WUH2 860 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 RABGGTAQ92696 567 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 RPGRQ92834 1020 aaKnown RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 DYNLL2Q96FJ2 89 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 DHTKD1Q96HY7 919 aaPredicted RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 SEMA6BQ9H3T3 888 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 C6orf50Q9HD87 102 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 CD209Q9NNX6 404 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 ZC3H7BQ9UGR2 993 aaKnown RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 V9GYY5 206 aaPredicted RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 SPATA31A6Q5VVP1 1343 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 MYO3BQ8WXR4 1341 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 PRR19A6NJB7 356 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 LGALS16A8MUM7 142 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 KLRF2D3W0D1 207 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 H0Y8X5 98 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 KIF20AO95235 890 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 CD3EP07766 207 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 PARP1P09874 1014 aaKnown RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 OR52Z1P0C646 297 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 HOXA10P31260 410 aaPredicted RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 BTDP43251 543 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 MAP4K2Q12851 820 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 KARSQ15046 597 aaKnown RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 NONOQ15233 471 aaKnown RBP eCLIP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 SLC35G1Q2M3R5 365 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 EGFLAMQ63HQ2 1017 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 CYP26C1Q6V0L0 522 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 RAD9BQ6WBX8 426 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 RSRC2Q7L4I2 434 aaKnown RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 PTF1AQ7RTS3 328 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 HEATR3Q7Z4Q2 680 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 GIMAP8Q8ND71 665 aaPredicted RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 BTN2A2Q8WVV5 523 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 IQCDQ96DY2 449 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 RRP36Q96EU6 259 aaKnown RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 RBM17Q96I25 401 aaKnown RBP8.72□□□□□ -1.01
CXCR4-201ENST00000241393 WDR24Q96S15 920 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 EYA3Q99504 573 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 CARD6Q9BX69 1037 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 BLZF1Q9H2G9 400 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 ABHD10Q9NUJ1 306 aa8.72□□□□□ -1.01
CXCR4-201ENST00000241393 BAZ2BQ9UIF8 2168 aaKnown RBP8.71□□□□□ -1.01
CXCR4-201ENST00000241393 FLT1P17948 1338 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 PITPNM2Q9BZ72 1349 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 BICDL2A1A5D9 508 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 KLRC4O43908 158 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 ZRANB2O95218 330 aaKnown RBP eCLIP8.71□□□□□ -1.02
CXCR4-201ENST00000241393 SYPP08247 313 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 CASP14P31944 242 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 PRCPP42785 496 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 SEPHS1P49903 392 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 FXR1P51114 621 aaKnown RBP eCLIP8.71□□□□□ -1.02
CXCR4-201ENST00000241393 NAPAP54920 295 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 RHBDL3P58872 404 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 ST5P78524 1137 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 GPSM2P81274 684 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 AMPD3Q01432 767 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 SQSTM1Q13501 440 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 PTPN21Q16825 1174 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 INF2Q27J81 1249 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 PRR5LQ6MZQ0 368 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 TMCO3Q6UWJ1 677 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 ZNF662Q6ZS27 426 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 SMIM5Q71RC9 77 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 FAM114A1Q8IWE2 563 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 TEX11Q8IYF3 940 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 CEP112Q8N8E3 955 aa8.71□□□□□ -1.02
CXCR4-201ENST00000241393 GOLGA1Q92805 767 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms