RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 FAM86B2P0C5J1 330 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 ODR4Q5SWX8 454 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 FAM178BQ8IXR5 827 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 FAM13CQ8NE31 585 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 SLCO1B3Q9NPD5 702 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 ASB3Q9Y575 518 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 LRP5O75197 1615 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 SYNGAP1Q96PV0 1343 aa15.08■□□□□ 0.01
PCDHB3-201ENST00000231130 SMAPO00193 183 aa15.08■□□□□ 0
PCDHB3-201ENST00000231130 OATP04181 439 aa15.08■□□□□ 0
PCDHB3-201ENST00000231130 USP46P62068 366 aa15.08■□□□□ 0
PCDHB3-201ENST00000231130 TAB3Q8N5C8 712 aaPredicted RBP15.08■□□□□ 0
PCDHB3-201ENST00000231130 SYT2Q8N9I0 419 aaPredicted RBP15.08■□□□□ 0
PCDHB3-201ENST00000231130 ZSWIM1Q9BR11 485 aa15.08■□□□□ 0
PCDHB3-201ENST00000231130 CD209Q9NNX6 404 aa15.08■□□□□ 0
PCDHB3-201ENST00000231130 NMRK1Q9NWW6 199 aa15.08■□□□□ 0
PCDHB3-201ENST00000231130 STOML1Q9UBI4 398 aa15.08■□□□□ 0
PCDHB3-201ENST00000231130 APEX2Q9UBZ4 518 aa15.08■□□□□ 0
PCDHB3-201ENST00000231130 MFSD4BQ5TF39 518 aa15.08■□□□□ 0
PCDHB3-201ENST00000231130 VSTM1Q6UX27 236 aa15.08■□□□□ 0
PCDHB3-201ENST00000231130 RBBP8NLQ8NC74 664 aaPredicted RBP15.08■□□□□ 0
PCDHB3-201ENST00000231130 P2RX7Q99572 595 aaKnown RBP15.08■□□□□ 0
PCDHB3-201ENST00000231130 ZBTB21Q9ULJ3 1066 aa15.08■□□□□ 0
PCDHB3-201ENST00000231130 GOLGA8IPA6NC78 632 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 GOLGA8JA6NMD2 632 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 SGPL1O95470 568 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 CBX6O95503 412 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 SSTR3P32745 418 aaPredicted RBP15.07■□□□□ 0
PCDHB3-201ENST00000231130 NPEPPSP55786 919 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 PPP4CP60510 307 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 CFAP157Q5JU67 520 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 SNX30Q5VWJ9 437 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 RNF168Q8IYW5 571 aaPredicted RBP15.07■□□□□ 0
PCDHB3-201ENST00000231130 SCG3Q8WXD2 468 aaKnown RBP15.07■□□□□ 0
PCDHB3-201ENST00000231130 ZNF653Q96CK0 615 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 FAM84AQ96KN4 292 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 CHST7Q9NS84 486 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 PARP2Q9UGN5 583 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 ARAP2Q8WZ64 1704 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 BHMG1C9JSJ3 638 aaPredicted RBP15.07■□□□□ 0
PCDHB3-201ENST00000231130 UNC5CO95185 931 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 FAM163BP0C2L3 166 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 MGAT5Q09328 741 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 RCN1Q15293 331 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 PPP2R5EQ16537 467 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 CLEC4GQ6UXB4 293 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 SLC13A5Q86YT5 568 aaPredicted RBP15.07■□□□□ 0
PCDHB3-201ENST00000231130 ARHGEF19Q8IW93 802 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 EIF2AK1Q9BQI3 630 aaKnown RBP15.07■□□□□ 0
PCDHB3-201ENST00000231130 NUP85Q9BW27 656 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 EMSYQ7Z589 1322 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 PAPPAQ13219 1627 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 RASA4BC9J798 803 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 CYP26A1O43174 497 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 RASA4O43374 803 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 OPHN1O60890 802 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 GM2AP17900 193 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 ITGA8P53708 1063 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 GPC5P78333 572 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 RRP1BQ14684 758 aaKnown RBP15.07■□□□□ 0
PCDHB3-201ENST00000231130 IRGCQ6NXR0 463 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 ECHDC2Q86YB7 292 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 C4orf33Q8N1A6 199 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 STMN2Q93045 179 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 CCDC127Q96BQ5 260 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 MYLK2Q9H1R3 596 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 DNAJC18Q9H819 358 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 DMAP1Q9NPF5 467 aaPredicted RBP15.07■□□□□ 0
PCDHB3-201ENST00000231130 SUGT1Q9Y2Z0 365 aa15.07■□□□□ 0
PCDHB3-201ENST00000231130 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.07■□□□□ 0
PCDHB3-201ENST00000231130 RHBDL3P58872 404 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 P3H1Q32P28 736 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.06■□□□□ 0
PCDHB3-201ENST00000231130 RINT1Q6NUQ1 792 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 LLGL2Q6P1M3 1020 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 SDCCAG8Q86SQ7 713 aaPredicted RBP15.06■□□□□ 0
PCDHB3-201ENST00000231130 RBM12BQ8IXT5 1001 aaKnown RBP15.06■□□□□ 0
PCDHB3-201ENST00000231130 LRRC37BQ96QE4 947 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 TBC1D10AQ9BXI6 508 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 DDX4Q9NQI0 724 aaKnown RBP15.06■□□□□ 0
PCDHB3-201ENST00000231130 ATXN10Q9UBB4 475 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 PCDHGA4Q9Y5G9 962 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 PITPNM2Q9BZ72 1349 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 CETPP11597 493 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 GNAZP19086 355 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 RPA1P27694 616 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 RASSF2P50749 326 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 Q4G0T1 1027 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 SLFN12Q8IYM2 578 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 ZSWIM2Q8NEG5 633 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 ZNF564Q8TBZ8 553 aaPredicted RBP15.06■□□□□ 0
PCDHB3-201ENST00000231130 UTP4Q969X6 686 aaKnown RBP15.06■□□□□ 0
PCDHB3-201ENST00000231130 RUNDC3BQ96NL0 473 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 YIPF2Q9BWQ6 316 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 SERPINB13Q9UIV8 391 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 ANKRD36CQ5JPF3 1778 aa15.06■□□□□ 0
PCDHB3-201ENST00000231130 GSTA5Q7RTV2 222 aa15.05■□□□□ 0
PCDHB3-201ENST00000231130 SCYL3Q8IZE3 742 aa15.05■□□□□ 0
PCDHB3-201ENST00000231130 TBC1D16Q8TBP0 767 aa15.05■□□□□ 0
PCDHB3-201ENST00000231130 ZWILCHQ9H900 591 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms