RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 PAXIP1Q6ZW49 1069 aaPredicted RBP26.76■■□□□ 1.87
RUNDC3A-201ENST00000225441 HOOK3Q86VS8 718 aa26.76■■□□□ 1.87
RUNDC3A-201ENST00000225441 ZNF473Q8WTR7 871 aaKnown RBP26.76■■□□□ 1.87
RUNDC3A-201ENST00000225441 PCYOX1Q9UHG3 505 aa26.76■■□□□ 1.87
RUNDC3A-201ENST00000225441 SLC12A6Q9UHW9 1150 aa26.76■■□□□ 1.87
RUNDC3A-201ENST00000225441 MEFVO15553 781 aaPredicted RBP26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 PHF2O75151 1096 aa26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 FTLP02792 175 aaPredicted RBP26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 NUDT17P0C025 328 aa26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 RARRES1P49788 294 aa26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 PPP2R2AP63151 447 aa26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 DRP2Q13474 957 aa26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 GNPTABQ3T906 1256 aa26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 TTC19Q6DKK2 380 aaPredicted RBP26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 C4orf19Q8IY42 314 aa26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 MYCBPAPQ8TBZ2 947 aa26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 ATP8B4Q8TF62 1192 aa26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 CCT8L2Q96SF2 557 aa26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 CPA4Q9UI42 421 aa26.75■■□□□ 1.87
RUNDC3A-201ENST00000225441 CYP4F22Q6NT55 531 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 FAM71AQ8IYT1 594 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 ABRAQ8N0Z2 381 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 CDHR1Q96JP9 859 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 ANKEF1Q9NU02 776 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 SEPT11Q9NVA2 429 aaKnown RBP26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 HSPBP1Q9NZL4 362 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 CTTNBP2NLQ9P2B4 639 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 COG5Q9UP83 839 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 STRNO43815 780 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 ATP9AO75110 1047 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 TM4SF4P48230 202 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 NCKAP1LP55160 1127 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 CENPTQ96BT3 561 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 ZIC5Q96T25 663 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 MPHOSPH6Q99547 160 aaKnown RBP26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 ZSWIM1Q9BR11 485 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 ZDHHC18Q9NUE0 388 aa26.74■■□□□ 1.87
RUNDC3A-201ENST00000225441 PLXNB2O15031 1838 aa26.73■■□□□ 1.87
RUNDC3A-201ENST00000225441 DDX39AO00148 427 aaKnown RBP26.73■■□□□ 1.87
RUNDC3A-201ENST00000225441 CTNNA2P26232 953 aa26.73■■□□□ 1.87
RUNDC3A-201ENST00000225441 MFAP3P55082 362 aa26.73■■□□□ 1.87
RUNDC3A-201ENST00000225441 PPP3CAQ08209 521 aa26.73■■□□□ 1.87
RUNDC3A-201ENST00000225441 GRM1Q13255 1194 aa26.73■■□□□ 1.87
RUNDC3A-201ENST00000225441 RDM1Q8NG50 284 aa26.73■■□□□ 1.87
RUNDC3A-201ENST00000225441 TAS2R14Q9NYV8 317 aa26.73■■□□□ 1.87
RUNDC3A-201ENST00000225441 IVNS1ABPQ9Y6Y0 642 aa26.73■■□□□ 1.87
RUNDC3A-201ENST00000225441 GMNCA6NCL1 334 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 LRRC37A2A6NM11 1700 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 MAPK4P31152 587 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 SFNP31947 248 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 GTF2H1P32780 548 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 MXI1P50539 228 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 JAK3P52333 1124 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 C1orf220Q5T0J3 134 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 HAUS6Q7Z4H7 955 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 GPR142Q7Z601 462 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 USP37Q86T82 979 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 OTUD6BQ8N6M0 293 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 FAM81BQ96LP2 452 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 LOC102724159A0A0B4J2E5 919 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 SPATA31C2B4DYI2 1134 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 PRPF4BQ13523 1007 aaKnown RBP26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 PWP2Q15269 919 aaKnown RBP26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 CYP1B1Q16678 543 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 PTPROQ16827 1216 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 SEL1L2Q5TEA6 688 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 JAMLQ86YT9 394 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 RPUSD2Q8IZ73 545 aaKnown RBP26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 TLCD1Q96CP7 247 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 CELF4Q9BZC1 486 aaKnown RBP26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 UVRAGQ9P2Y5 699 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 COQ4Q9Y3A0 265 aa26.72■■□□□ 1.87
RUNDC3A-201ENST00000225441 TRAPPC3O43617 180 aa26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 KCNA2P16389 499 aa26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 ADORA2AP29274 412 aa26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 ICAM3P32942 547 aa26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 ARHGEF19Q8IW93 802 aa26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 MICALL1Q8N3F8 863 aa26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 ALG3Q92685 438 aa26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 TMEM109Q9BVC6 243 aa26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 PABPC3Q9H361 631 aaKnown RBP26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 ZFYVE28Q9HCC9 887 aa26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 NOCTQ9UK39 431 aaKnown RBP26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 MTUS1Q9ULD2 1270 aa26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 SAMM50Q9Y512 469 aa26.71■■□□□ 1.87
RUNDC3A-201ENST00000225441 KIAA0391O15091 583 aaKnown RBP26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 LRRN2O75325 713 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 FSBPO95073 299 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 CYP1A2P05177 515 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 FLT3P36888 993 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 BYSLQ13895 437 aaKnown RBP26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 C17orf99Q6UX52 265 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 PLEKHH3Q7Z736 793 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 PACS2Q86VP3 889 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 RDH13Q8NBN7 331 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 TMC2Q8TDI7 906 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 SHC3Q92529 594 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 PGM2Q96G03 612 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 DPH5Q9H2P9 285 aa26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 CREBZFQ9NS37 354 aa26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms