RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 TCHPQ9BT92 498 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 TMEM117Q9H0C3 514 aa16.4■□□□□ 0.22
PAF1-201ENST00000221265 UPF3AQ9H1J1 476 aaKnown RBP16.4■□□□□ 0.22
PAF1-201ENST00000221265 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.4■□□□□ 0.22
PAF1-201ENST00000221265 ZNF233A6NK53 670 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 FAM189A1O60320 539 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 ADAMTS4O75173 837 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 TOM1L1O75674 476 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 RHOXF2BP0C7M4 288 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 TNFSF9P41273 254 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 MAP2K1Q02750 393 aaPredicted RBP16.39■□□□□ 0.21
PAF1-201ENST00000221265 PRPF4BQ13523 1007 aaKnown RBP16.39■□□□□ 0.21
PAF1-201ENST00000221265 HNRNPLLQ8WVV9 542 aaKnown RBP16.39■□□□□ 0.21
PAF1-201ENST00000221265 RHOXF2Q9BQY4 288 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 NFKBIZQ9BYH8 718 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 INTS2Q9H0H0 1204 aaKnown RBP16.39■□□□□ 0.21
PAF1-201ENST00000221265 CDHR5Q9HBB8 845 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 GINS2Q9Y248 185 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 PTPRJQ12913 1337 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 SRGAP2O75044 1071 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 CYP2C9P11712 490 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 FGFR4P22455 802 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 EIF4A3P38919 411 aaKnown RBP16.39■□□□□ 0.21
PAF1-201ENST00000221265 ATF7IP2Q5U623 682 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 RAET1EQ8TD07 263 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 ELMO3Q96BJ8 720 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 SCLT1Q96NL6 688 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 PDE11AQ9HCR9 933 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 PTPRHQ9HD43 1115 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 XPNPEP3Q9NQH7 507 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 SAR1BQ9Y6B6 198 aa16.39■□□□□ 0.21
PAF1-201ENST00000221265 LCA5LO95447 670 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 HMGCRP04035 888 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 PROZP22891 400 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 HOXD10P28358 340 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 MXI1P50539 228 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 POU5F1BQ06416 359 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 KIF5AQ12840 1032 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 SPA17Q15506 151 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 BEND6Q5SZJ8 279 aaPredicted RBP16.38■□□□□ 0.21
PAF1-201ENST00000221265 MAP3K21Q5TCX8 1036 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 IQCEQ6IPM2 695 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 TSHZ1Q6ZSZ6 1077 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 IFNLR1Q8IU57 520 aaPredicted RBP16.38■□□□□ 0.21
PAF1-201ENST00000221265 CEP120Q8N960 986 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 TMC2Q8TDI7 906 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 DNAJB3Q8WWF6 145 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 ZNF516Q92618 1163 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 CPB2Q96IY4 423 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 EDEM3Q9BZQ6 932 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 ADAMTS10Q9H324 1103 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 PCDHA13Q9Y5I0 950 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 TRIP11Q15643 1979 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 MACROD2A1Z1Q3 448 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 KIF11P52732 1056 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 EPC2Q52LR7 807 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 C7orf31Q8N865 590 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 SEMA4DQ92854 862 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 TSGA10Q9BZW7 698 aa16.38■□□□□ 0.21
PAF1-201ENST00000221265 RBAKQ9NYW8 714 aaPredicted RBP16.38■□□□□ 0.21
PAF1-201ENST00000221265 MAP2K7O14733 419 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 FKTNO75072 461 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 GPR32O75388 356 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 ARID5AQ03989 594 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 MCL1Q07820 350 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 RAPGEF1Q13905 1077 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 TMEM132AQ24JP5 1023 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 NBPF20Q3BBV1 942 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 ZNF568Q3ZCX4 644 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 HGSNATQ68CP4 663 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 PHLDB3Q6NSJ2 640 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 MMS19Q96T76 1030 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 MTG1Q9BT17 334 aaPredicted RBP16.37■□□□□ 0.21
PAF1-201ENST00000221265 KATNAL1Q9BW62 490 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 KIAA1586Q9HCI6 787 aa16.37■□□□□ 0.21
PAF1-201ENST00000221265 PRMT7Q9NVM4 692 aaPredicted RBP16.37■□□□□ 0.21
PAF1-201ENST00000221265 SMIM35A0A1B0GVV1 85 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 C17orf102A2RUQ5 167 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 ARF4P18085 180 aaPredicted RBP16.36■□□□□ 0.21
PAF1-201ENST00000221265 HOXC8P31273 242 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 OSTNP61366 133 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 VSNL1P62760 191 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 PSMD6Q15008 389 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 FAM187BQ17R55 369 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 ASTE1Q2TB18 679 aaPredicted RBP16.36■□□□□ 0.21
PAF1-201ENST00000221265 MPZL3Q6UWV2 235 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 SV2AQ7L0J3 742 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 TMEM192Q8IY95 271 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 TAS1R2Q8TE23 839 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 SECISBP2LQ93073 1101 aaKnown RBP16.36■□□□□ 0.21
PAF1-201ENST00000221265 IFIH1Q9BYX4 1025 aaKnown RBP16.36■□□□□ 0.21
PAF1-201ENST00000221265 SPC25Q9HBM1 224 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 ABCB6Q9NP58 842 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 CNTNAP2Q9UHC6 1331 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 ANO9A1A5B4 782 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 KIAA0391O15091 583 aaKnown RBP16.36■□□□□ 0.21
PAF1-201ENST00000221265 ZEB2O60315 1214 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 LDHAP00338 332 aaKnown RBP16.36■□□□□ 0.21
PAF1-201ENST00000221265 ASGR1P07306 291 aa16.36■□□□□ 0.21
PAF1-201ENST00000221265 SMC1AQ14683 1233 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms