RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 CDK17Q00537 523 aa18.85■□□□□ 0.61
EXTL3-201ENST00000220562 SEMA3FQ13275 785 aa18.85■□□□□ 0.61
EXTL3-201ENST00000220562 VCPP55072 806 aaKnown RBP18.85■□□□□ 0.61
EXTL3-201ENST00000220562 P3H1Q32P28 736 aa18.85■□□□□ 0.61
EXTL3-201ENST00000220562 MFSD14CQ5VZR4 134 aa18.85■□□□□ 0.61
EXTL3-201ENST00000220562 OR6J1Q8NGC5 347 aa18.85■□□□□ 0.61
EXTL3-201ENST00000220562 YIPF3Q9GZM5 350 aa18.85■□□□□ 0.61
EXTL3-201ENST00000220562 TRIM45Q9H8W5 580 aaPredicted RBP18.85■□□□□ 0.61
EXTL3-201ENST00000220562 CLTCL1P53675 1640 aa18.85■□□□□ 0.61
EXTL3-201ENST00000220562 QRICH2Q9H0J4 1663 aa18.85■□□□□ 0.61
EXTL3-201ENST00000220562 CHUKO15111 745 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 EXOSC10Q01780 885 aaKnown RBP18.84■□□□□ 0.61
EXTL3-201ENST00000220562 PDIA5Q14554 519 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 ZC3H12BQ5HYM0 836 aaKnown RBP18.84■□□□□ 0.61
EXTL3-201ENST00000220562 ATG9AQ7Z3C6 839 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 ATL2Q8NHH9 583 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 UNC45AQ9H3U1 944 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 TCP11X1B4DZS4 312 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 DPYDQ12882 1025 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 APEX2Q9UBZ4 518 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 GGT7Q9UJ14 662 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 PIN4Q9Y237 131 aaKnown RBP18.84■□□□□ 0.61
EXTL3-201ENST00000220562 FARP1Q9Y4F1 1045 aaPredicted RBP18.84■□□□□ 0.61
EXTL3-201ENST00000220562 ADRA2BP18089 450 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 EFNA5P52803 228 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 FMR1Q06787 632 aaKnown RBP eCLIP18.84■□□□□ 0.61
EXTL3-201ENST00000220562 TTC23LQ6PF05 361 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 ANO5Q75V66 913 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 CHCHD3Q9NX63 227 aaKnown RBP18.84■□□□□ 0.61
EXTL3-201ENST00000220562 STX18Q9P2W9 335 aaKnown RBP18.84■□□□□ 0.61
EXTL3-201ENST00000220562 FAM205CA6NFA0 338 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 STAT4Q14765 748 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 NSUN4Q96CB9 384 aaKnown RBP18.84■□□□□ 0.61
EXTL3-201ENST00000220562 TRIM51Q9BSJ1 452 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 HMGCS2P54868 508 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 SESN2P58004 480 aaPredicted RBP18.84■□□□□ 0.61
EXTL3-201ENST00000220562 SPATA2LQ8IUW3 424 aaPredicted RBP18.84■□□□□ 0.61
EXTL3-201ENST00000220562 TMEM143Q96AN5 459 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 TRABDQ9H4I3 376 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 PIDD1Q9HB75 910 aa18.84■□□□□ 0.61
EXTL3-201ENST00000220562 HERC5Q9UII4 1024 aaKnown RBP18.84■□□□□ 0.61
EXTL3-201ENST00000220562 CROCC2H7BZ55 1655 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 ASB14A6NK59 587 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 PHF2O75151 1096 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 SH3TC2Q8TF17 1288 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 TRIM62Q9BVG3 475 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 SNX12Q9UMY4 172 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 CDC42BPBQ9Y5S2 1711 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 GNL1P36915 607 aaPredicted RBP18.83■□□□□ 0.61
EXTL3-201ENST00000220562 STAT5BP51692 787 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 CEP55Q53EZ4 464 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 CATSPER3Q86XQ3 398 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 REEP2Q9BRK0 252 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 ADAM33Q9BZ11 813 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 RNF181Q9P0P0 153 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 ENO1P06733 434 aaKnown RBP18.83■□□□□ 0.61
EXTL3-201ENST00000220562 ACOT2P49753 483 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 VSNL1P62760 191 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 SYDE1Q6ZW31 735 aaPredicted RBP18.83■□□□□ 0.61
EXTL3-201ENST00000220562 COG1Q8WTW3 980 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 GRAMD1AQ96CP6 724 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 TRIM54Q9BYV2 358 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 TJP2Q9UDY2 1190 aa18.83■□□□□ 0.61
EXTL3-201ENST00000220562 ZBTB7AO95365 584 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 MYBP10242 640 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 ATP6V1E1P36543 226 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 NBPF10Q6P3W6 841 aaKnown RBP18.83■□□□□ 0.6
EXTL3-201ENST00000220562 RUBCNQ92622 972 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 TNIP3Q96KP6 325 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 DACH2Q96NX9 599 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 CHP1Q99653 195 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 OSBPL1AQ9BXW6 950 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 MAP3K20Q9NYL2 800 aaKnown RBP18.83■□□□□ 0.6
EXTL3-201ENST00000220562 RGS7P49802 495 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 MAPRE2Q15555 327 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 NR1H4Q96RI1 486 aaPredicted RBP18.83■□□□□ 0.6
EXTL3-201ENST00000220562 SENP7Q9BQF6 1050 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 A2ML1A8K2U0 1454 aa18.83■□□□□ 0.6
EXTL3-201ENST00000220562 CFAP73A6NFT4 308 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 STK33Q9BYT3 514 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 ZFATQ9P243 1243 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.82■□□□□ 0.6
EXTL3-201ENST00000220562 SYF2O95926 243 aaKnown RBP18.82■□□□□ 0.6
EXTL3-201ENST00000220562 THEMIS2Q5TEJ8 643 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 TRIM9Q9C026 710 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 AGAP1Q9UPQ3 857 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 TXNP10599 105 aaKnown RBP18.82■□□□□ 0.6
EXTL3-201ENST00000220562 LONRF1Q17RB8 773 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 WDR72Q3MJ13 1102 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 SPATA21Q7Z572 469 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 APPL2Q8NEU8 664 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 SH2D3AQ9BRG2 576 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 AIPL1Q9NZN9 384 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 AFF2P51816 1311 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 LRRC7Q96NW7 1537 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 DAB2P98082 770 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 TEKT4Q8WW24 435 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 MCEEQ96PE7 176 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 EPAS1Q99814 870 aa18.82■□□□□ 0.6
EXTL3-201ENST00000220562 TIPINQ9BVW5 301 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms