RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 INPP4AQ96PE3 977 aaPredicted RBP13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 RANBP17Q9H2T7 1088 aaKnown RBP13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 GTF3C4Q9UKN8 822 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 GOLGA8MH3BSY2 632 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 PSMA2P25787 234 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 BYSLQ13895 437 aaKnown RBP13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 PCNX4Q63HM2 1172 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 PHLDB3Q6NSJ2 640 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 HIBCHQ6NVY1 386 aaPredicted RBP13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 BTNL9Q6UXG8 535 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 FAM83AQ86UY5 434 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 DBR1Q9UK59 544 aaKnown RBP13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 IGSF9BQ9UPX0 1349 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 GGPS1O95749 300 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 ZNF131P52739 623 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 MARSP56192 900 aaKnown RBP13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 DGKZQ13574 1117 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 BBS9Q3SYG4 887 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 FOXR2Q6PJQ5 311 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 SLC13A5Q86YT5 568 aaPredicted RBP13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 SMC6Q96SB8 1091 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 JPH2Q9BR39 696 aaPredicted RBP13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 APOL6Q9BWW8 343 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 RPF1Q9H9Y2 349 aaKnown RBP13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 PCSK1NQ9UHG2 260 aa13.17□□□□□ -0.3
TM9SF4-201ENST00000217315 MYO5AQ9Y4I1 1855 aaKnown RBP13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 TJP3O95049 919 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 PHBP35232 272 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 YWHAGP61981 247 aaKnown RBP eCLIP13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 ZNF667Q5HYK9 610 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 C4orf19Q8IY42 314 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 ATG4AQ8WYN0 398 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 C9orf72Q96LT7 481 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 HESX1Q9UBX0 185 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 CICQ96RK0 1608 aaPredicted RBP13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 TBXAS1P24557 533 aaPredicted RBP13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 IL9RQ01113 521 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 NCOA4Q13772 614 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 CDO1Q16878 200 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 ARHGEF18Q6ZSZ5 1173 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 TATDN2Q93075 761 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 OTUD5Q96G74 571 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 ADAM33Q9BZ11 813 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 NWD2Q9ULI1 1742 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 MEFVO15553 781 aaPredicted RBP13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 BRAFP15056 766 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 CDR2Q01850 454 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 NEDD9Q14511 834 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 PGM5Q15124 567 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 LONRF1Q17RB8 773 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 FAM47EQ6ZV65 393 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 SESTD1Q86VW0 696 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 C7orf31Q8N865 590 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 KCTD6Q8NC69 237 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 RBBP8NLQ8NC74 664 aaPredicted RBP13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 LNX1Q8TBB1 728 aaPredicted RBP13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 CHMP6Q96FZ7 201 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 CFAP57Q96MR6 1250 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 GDF3Q9NR23 364 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 PXMP2Q9NR77 195 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 FBXO40Q9UH90 709 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 FZD1Q9UP38 647 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 MYH8P13535 1937 aa13.16□□□□□ -0.3
TM9SF4-201ENST00000217315 CA4P22748 312 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 CDR2LQ86X02 465 aaPredicted RBP13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 LRRC8CQ8TDW0 803 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 HEXIM2Q96MH2 286 aaKnown RBP13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 CYP26B1Q9NR63 512 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 GGA3Q9NZ52 723 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 MYH10P35580 1976 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 RASA4BC9J798 803 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 MAFGO15525 162 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 RASA4O43374 803 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 SLC8A3P57103 927 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 PTGISQ16647 500 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 IZUMO3Q5VZ72 239 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 OR6B2Q6IFH4 312 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 AADACL2Q6P093 401 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 ATP8B4Q8TF62 1192 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 KRT35Q92764 455 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 TBC1D31Q96DN5 1066 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 RBM41Q96IZ5 413 aaKnown RBP13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 MRPL4Q9BYD3 311 aaKnown RBP13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 TAF1P21675 1872 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 RRM1P23921 792 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 NOP14P78316 857 aaKnown RBP13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 GPS1Q13098 491 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 E2F5Q15329 346 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 KYNUQ16719 465 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 DUOXA2Q1HG44 320 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 PPP1R2P3Q6NXS1 205 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 APOBEC3FQ8IUX4 373 aaKnown RBP13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 ATL2Q8NHH9 583 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 HSPH1Q92598 858 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 SNF8Q96H20 258 aa13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 TACO1Q9BSH4 297 aaKnown RBP13.15□□□□□ -0.3
TM9SF4-201ENST00000217315 NGRNQ9NPE2 291 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms