RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 PLEKHA5Q9HAU0 1116 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 IL18RAPO95256 599 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 ACADMP11310 421 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 BZW1Q7L1Q6 419 aaKnown RBP14.62□□□□□ -0.07
SIX4-201ENST00000216513 TAS2R42Q7RTR8 314 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 RAB23Q9ULC3 237 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 VWDEQ8N2E2 1590 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 THP07101 528 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 SOX10P56693 466 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 TTC23LQ6PF05 361 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 P3H4Q92791 437 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 CFAP36Q96G28 342 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 PLCB1Q9NQ66 1216 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 BAIAP2L1Q9UHR4 511 aa14.62□□□□□ -0.07
SIX4-201ENST00000216513 BTBD19C9JJ37 291 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 RPLP2P05387 115 aaKnown RBP14.61□□□□□ -0.07
SIX4-201ENST00000216513 FGFR2P21802 821 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 AP1B1Q10567 949 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 TREML2Q5T2D2 321 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 FYB2Q5VWT5 728 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 FAM161BQ96MY7 647 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 FAM50BQ9Y247 325 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 EIF3CLB5ME19 914 aaKnown RBP14.61□□□□□ -0.07
SIX4-201ENST00000216513 PPM1LQ5SGD2 360 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 CATSPERGQ6ZRH7 1159 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 EIF3CQ99613 913 aaKnown RBP14.61□□□□□ -0.07
SIX4-201ENST00000216513 FAM198AQ9UFP1 575 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 NCOA4Q13772 614 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 ARFGAP2Q8N6H7 521 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 CNOT8Q9UFF9 292 aaKnown RBP14.61□□□□□ -0.07
SIX4-201ENST00000216513 ANAPC7Q9UJX3 599 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 PDS5AQ29RF7 1337 aaKnown RBP14.61□□□□□ -0.07
SIX4-201ENST00000216513 RGS16O15492 202 aaPredicted RBP14.61□□□□□ -0.07
SIX4-201ENST00000216513 ITGB3P05106 788 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 PCK1P35558 622 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 RNF217Q8TC41 542 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 TRAPPC12Q8WVT3 735 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 ADAM33Q9BZ11 813 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 CALB1P05937 261 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 KCNH2Q12809 1159 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 FIBCD1Q8N539 461 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 MCUR1Q96AQ8 359 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 DPP3Q9NY33 737 aa14.61□□□□□ -0.07
SIX4-201ENST00000216513 BAG2O95816 211 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 CKBP12277 381 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 PSMC6P62333 389 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 IL1RL1Q01638 556 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 ZC2HC1CQ53FD0 456 aaPredicted RBP14.6□□□□□ -0.07
SIX4-201ENST00000216513 RESP18Q5W5W9 173 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 FBXL13Q8NEE6 735 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 MAGOHBQ96A72 148 aaKnown RBP14.6□□□□□ -0.07
SIX4-201ENST00000216513 MROH7Q68CQ1 1323 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.6□□□□□ -0.07
SIX4-201ENST00000216513 MSH4O15457 936 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 CIB2O75838 187 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 SPRYD7Q5W111 196 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 UCMAQ8WVF2 138 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 EPN1Q9Y6I3 576 aaPredicted RBP14.6□□□□□ -0.07
SIX4-201ENST00000216513 H0Y626 953 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 SYNCRIPO60506 623 aaKnown RBP14.6□□□□□ -0.07
SIX4-201ENST00000216513 TUBB4AP04350 444 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 STX2P32856 288 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 PGM5Q15124 567 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 FKBP1CQ5VVH2 108 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 TBX3O15119 743 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 CLTAP09496 248 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 CDH18Q13634 790 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 PALB2Q86YC2 1186 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 IDI2Q9BXS1 227 aa14.6□□□□□ -0.07
SIX4-201ENST00000216513 UBQLN1Q9UMX0 589 aaKnown RBP14.6□□□□□ -0.07
SIX4-201ENST00000216513 ARHGAP42A6NI28 874 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 MDM2Q00987 491 aaPredicted RBP14.59□□□□□ -0.07
SIX4-201ENST00000216513 AMPD2Q01433 879 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 GTF2H3Q13889 308 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 FAM171A1Q5VUB5 890 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 SLAIN1Q8ND83 568 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 HPDLQ96IR7 371 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 CABS1Q96KC9 395 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 NUDCD1Q96RS6 583 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 THG1LQ9NWX6 298 aaKnown RBP14.59□□□□□ -0.07
SIX4-201ENST00000216513 DBR1Q9UK59 544 aaKnown RBP14.59□□□□□ -0.07
SIX4-201ENST00000216513 GOLGA8MH3BSY2 632 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 CA12O43570 354 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 CERS5Q8N5B7 392 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 SCFD1Q8WVM8 642 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 LIG3P49916 1009 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 PCNX4Q63HM2 1172 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 PDCD2LQ9BRP1 358 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 GPRC5CQ9NQ84 441 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 PACSIN2Q9UNF0 486 aaPredicted RBP14.59□□□□□ -0.07
SIX4-201ENST00000216513 SOCS7O14512 581 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 SART1O43290 800 aaKnown RBP14.59□□□□□ -0.07
SIX4-201ENST00000216513 NAA30Q147X3 362 aaPredicted RBP14.59□□□□□ -0.07
SIX4-201ENST00000216513 SH2D4BQ5SQS7 431 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 COPS5Q92905 334 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 KANSL3Q9P2N6 904 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 PCDHB8Q9UN66 801 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 IGSF9BQ9UPX0 1349 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 PVALEFA0A1B0GWK0 134 aa14.59□□□□□ -0.07
SIX4-201ENST00000216513 NOL3O60936 208 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms