RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 H0Y858 1186 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 K7ERI5 159 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 GALR2O43603 387 aaPredicted RBP16.5■□□□□ 0.23
UPK3A-201ENST00000216211 NARSO43776 548 aaKnown RBP16.5■□□□□ 0.23
UPK3A-201ENST00000216211 C1RP00736 705 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 CDC25AP30304 524 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 PEX3P56589 373 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 BECN1Q14457 450 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 PSMD5Q16401 504 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 IL17AQ16552 155 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 GLRA4Q5JXX5 417 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 ASTLQ6HA08 431 aaPredicted RBP16.5■□□□□ 0.23
UPK3A-201ENST00000216211 LNX1Q8TBB1 728 aaPredicted RBP16.5■□□□□ 0.23
UPK3A-201ENST00000216211 RSAD2Q8WXG1 361 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 ATOH1Q92858 354 aaPredicted RBP16.5■□□□□ 0.23
UPK3A-201ENST00000216211 CLSTN3Q9BQT9 956 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 MYH15Q9Y2K3 1946 aa16.5■□□□□ 0.23
UPK3A-201ENST00000216211 CCDC169A6NNP5 214 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 PAPLNO95428 1278 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 IGFBP6P24592 240 aaPredicted RBP16.49■□□□□ 0.23
UPK3A-201ENST00000216211 NUBP1P53384 320 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 KRT79Q5XKE5 535 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 CWF19L1Q69YN2 538 aaKnown RBP16.49■□□□□ 0.23
UPK3A-201ENST00000216211 DAW1Q8N136 415 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 FLCNQ8NFG4 579 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 PIK3R5Q8WYR1 880 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 PRKD2Q9BZL6 878 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.49■□□□□ 0.23
UPK3A-201ENST00000216211 IGSF9Q9P2J2 1179 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 EPS15L1Q9UBC2 864 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 FBXW11Q9UKB1 542 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 DNM3Q9UQ16 869 aa16.49■□□□□ 0.23
UPK3A-201ENST00000216211 PHLPP2Q6ZVD8 1323 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 LAD1O00515 517 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 ADAM12O43184 909 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 HIP1RO75146 1068 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 ZMYND10O75800 440 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 PRPHP41219 470 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 NPTX2P47972 431 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 CLCNKBP51801 687 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 MCTP1Q6DN14 999 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 DTHD1Q6ZMT9 781 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 GET4Q7L5D6 327 aaPredicted RBP16.48■□□□□ 0.23
UPK3A-201ENST00000216211 KCNK18Q7Z418 384 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 CEP120Q8N960 986 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 PPP1R10Q96QC0 940 aaKnown RBP16.48■□□□□ 0.23
UPK3A-201ENST00000216211 ACO2Q99798 780 aaKnown RBP16.48■□□□□ 0.23
UPK3A-201ENST00000216211 MMTAG2Q9BU76 263 aaKnown RBP16.48■□□□□ 0.23
UPK3A-201ENST00000216211 RUSC1Q9BVN2 902 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 IRF2BPLQ9H1B7 796 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 GOLGA2P5Q9HBQ8 144 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 DAXXQ9UER7 740 aaPredicted RBP16.48■□□□□ 0.23
UPK3A-201ENST00000216211 FBXL21Q9UKT6 434 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 TNFSF13BQ9Y275 285 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 NOTCH4Q99466 2003 aa16.48■□□□□ 0.23
UPK3A-201ENST00000216211 CFHP08603 1231 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 NPR3P17342 541 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 CLCN5P51795 746 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 OSTNP61366 133 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 ELAVL2Q12926 359 aaKnown RBP16.47■□□□□ 0.23
UPK3A-201ENST00000216211 MAPK7Q13164 816 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 DMP1Q13316 513 aaPredicted RBP16.47■□□□□ 0.23
UPK3A-201ENST00000216211 RABEP1Q15276 862 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 ZRSR1Q15695 479 aaKnown RBP16.47■□□□□ 0.23
UPK3A-201ENST00000216211 RINT1Q6NUQ1 792 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 TAS1R3Q7RTX0 852 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 APBB1IPQ7Z5R6 666 aaPredicted RBP16.47■□□□□ 0.23
UPK3A-201ENST00000216211 SIX5Q8N196 739 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 ST13P5Q8NFI4 369 aaPredicted RBP16.47■□□□□ 0.23
UPK3A-201ENST00000216211 CDT1Q9H211 546 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 TMEM134Q9H6X4 195 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 KMT5AQ9NQR1 393 aa16.47■□□□□ 0.23
UPK3A-201ENST00000216211 CACNA1HO95180 2353 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 PI15O43692 258 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 B3GAT3O94766 335 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 GRM5P41594 1212 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 NTHL1P78549 312 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 ZNF568Q3ZCX4 644 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 PPM1LQ5SGD2 360 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 LIN9Q5TKA1 542 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 CD300LGQ6UXG3 332 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.46■□□□□ 0.23
UPK3A-201ENST00000216211 C1orf186Q6ZWK4 172 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 GRASPQ7Z6J2 395 aaPredicted RBP16.46■□□□□ 0.23
UPK3A-201ENST00000216211 SLC44A3Q8N4M1 653 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 DRC1Q96MC2 740 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 CCDC94Q9BW85 323 aaPredicted RBP16.46■□□□□ 0.23
UPK3A-201ENST00000216211 TARS2Q9BW92 718 aaKnown RBP16.46■□□□□ 0.23
UPK3A-201ENST00000216211 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.46■□□□□ 0.23
UPK3A-201ENST00000216211 ARHGAP28Q9P2N2 729 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 KIF3AQ9Y496 699 aa16.46■□□□□ 0.23
UPK3A-201ENST00000216211 SMIM28A0A1B0GU29 152 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 SFI1A8K8P3 1242 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 TMEM189-UBE2V1I3L0A0 370 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 I3L4J1 428 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 SLC16A4O15374 487 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 CCL16O15467 120 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 ST18O60284 1047 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 C8AP07357 584 aa16.45■□□□□ 0.22
UPK3A-201ENST00000216211 LAMP2P13473 410 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms