RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 BTBD6Q96KE9 485 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 RNPC3Q96LT9 517 aaKnown RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 MMP19Q99542 508 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 SYT17Q9BSW7 474 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 AMACRQ9UHK6 382 aa8.58□□□□□ -1.04
HMGXB4-201ENST00000216106 CYP2C19P33261 490 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 EPHX2P34913 555 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 MARCKSL1P49006 195 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 CLDN10P78369 228 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 PAK2Q13177 524 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 KCTD2Q14681 263 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ZACNQ401N2 412 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 EAPPQ56P03 285 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 AADACL2Q6P093 401 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 LRRC71Q8N4P6 559 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 PRPF31Q8WWY3 499 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 KRT35Q92764 455 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ZNF653Q96CK0 615 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 NR2E1Q9Y466 385 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ADCY3O60266 1144 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 MAFO75444 373 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 PIGRP01833 764 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 C4BPAP04003 597 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 COPB2P35606 906 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 HADHBP55084 474 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ERVK-9P63128 1117 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 COPS5Q92905 334 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 CAVIN3Q969G5 261 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ZNF668Q96K58 619 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 GPR20Q99678 358 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 NUP85Q9BW27 656 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 FAM204AQ9H8W3 233 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 A0A0B4J269 797 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 CCDC188H7C350 402 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 VNN1O95497 513 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 SRGAP2CP0DJJ0 459 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 WDR44Q5JSH3 913 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 SLFN12LQ6IEE8 588 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 C11orf63Q6NUN7 778 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 DPY19L2Q6NUT2 758 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 CPNE8Q86YQ8 564 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ZNF564Q8TBZ8 553 aaPredicted RBP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 MPHOSPH6Q99547 160 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 CELF4Q9BZC1 486 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 CARD9Q9H257 536 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ZC3H11AO75152 810 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 CYP2C8P10632 490 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 COMTP21964 271 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 TNFSF9P41273 254 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 LMAN1P49257 510 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ENPEPQ07075 957 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 HLTFQ14527 1009 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 CELF3Q5SZQ8 465 aaKnown RBP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ENOSF1Q7L5Y1 443 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ZBTB33Q86T24 672 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 DDX42Q86XP3 938 aaKnown RBP eCLIP8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 OR5B17Q8NGF7 314 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 TRAPPC12Q8WVT3 735 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ZBTB10Q96DT7 871 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 SPATA33Q96N06 139 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 ADGRA2Q96PE1 1338 aa8.57□□□□□ -1.04
HMGXB4-201ENST00000216106 DNAJC25-GNG10A0A024R161 153 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 KIAA0391O15091 583 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 CLDN3O15551 220 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 TTI1O43156 1089 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 GRIN3BO60391 1043 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 LDHAP00338 332 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 GJB1P08034 283 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 OSBPP22059 807 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 GJA5P36382 358 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 SCARA3Q6AZY7 606 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 GPAT2Q6NUI2 795 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 USP50Q70EL3 339 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 RNF149Q8NC42 400 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 EXOC4Q96A65 974 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 TMEM134Q9H6X4 195 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 ERVK-5Q9HDB9 667 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 TRPC6Q9Y210 931 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 EVPLQ92817 2033 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 CNTNAP2Q9UHC6 1331 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 ZBTB42B2RXF5 422 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 LAMTOR4Q0VGL1 99 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 MKRN4PQ13434 485 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 C2CD6Q53TS8 623 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 FASTKD5Q7L8L6 764 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 DHX37Q8IY37 1157 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 BBXQ8WY36 941 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 KCNN1Q92952 543 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 FAM167AQ96KS9 214 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 TCHPQ9BT92 498 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 TAF1DQ9H5J8 278 aaPredicted RBP8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 EFCC1Q9HA90 598 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 APOBEC3GQ9HC16 384 aaKnown RBP8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 PDGFCQ9NRA1 345 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 GTF3C4Q9UKN8 822 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 CENPFP49454 3210 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 UMODL1Q5DID0 1318 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 MSCO60682 206 aa8.56□□□□□ -1.04
HMGXB4-201ENST00000216106 CYP1A2P05177 515 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms