RNA–Protein interactions for RNA: ENST00000215829.7

SNRPD3-201, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD3, Length 1,763 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-201ENST00000215829 GRM5P41594 1212 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 GJA8P48165 433 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 FBXO47Q5MNV8 452 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 KLHDC7AQ5VTJ3 777 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 C15orf39Q6ZRI6 1047 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 FAM212AQ96EL1 285 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 INTS2Q9H0H0 1204 aaKnown RBP17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 GANQ9H2C0 597 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 TMX1Q9H3N1 280 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 SIX2Q9NPC8 291 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 CHST12Q9NRB3 414 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 CEP72Q9P209 647 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 SQORQ9Y6N5 450 aa17.27■□□□□ 0.35
SNRPD3-201ENST00000215829 CXCL8P10145 99 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 AP3M2P53677 418 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 APBA1Q02410 837 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 NFX1Q12986 1120 aaKnown RBP17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 ZACNQ401N2 412 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 UBXN11Q5T124 520 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 LMBRD2Q68DH5 695 aaPredicted RBP17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 WDR49Q8IV35 697 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 USP38Q8NB14 1042 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 OR8K1Q8NGG5 319 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 CAGE1Q8TC20 777 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 ACAP3Q96P50 834 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 AGO3Q9H9G7 860 aaKnown RBP17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 ABHD10Q9NUJ1 306 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 FBXL5Q9UKA1 691 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 PTPRJQ12913 1337 aa17.26■□□□□ 0.35
SNRPD3-201ENST00000215829 UCHL3P15374 230 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 POLR2FP61218 127 aaKnown RBP17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 CCZ1BP86790 482 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 CCZ1P86791 482 aaPredicted RBP17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 LPIN1Q14693 890 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 SLC10A6Q3KNW5 377 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 TRAF7Q6Q0C0 670 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 SLC39A5Q6ZMH5 540 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 CACNA2D4Q7Z3S7 1137 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 ANKLE1Q8NAG6 615 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 FBXL13Q8NEE6 735 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 CCDC112Q8NEF3 446 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 BAP1Q92560 729 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 DNAJC7Q99615 494 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 CCDC94Q9BW85 323 aaPredicted RBP17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 TRIM6Q9C030 488 aaPredicted RBP17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 ERVK-5Q9HDB9 667 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 MROH7Q68CQ1 1323 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 LACTBL1A8MY62 500 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 MEFVO15553 781 aaPredicted RBP17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 GHRP10912 638 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 SKILP12757 684 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 DUOXA2Q1HG44 320 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 TDRD10Q5VZ19 366 aaKnown RBP17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 OR5B17Q8NGF7 314 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 TAS1R2Q8TE23 839 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 OSBPL7Q9BZF2 842 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 ASB7Q9H672 318 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 RAB20Q9NX57 234 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 PADI3Q9ULW8 664 aa17.25■□□□□ 0.35
SNRPD3-201ENST00000215829 ANK1P16157 1881 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 NRDCO43847 1150 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 COL6A1P12109 1028 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 CD52P31358 61 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 PAK2Q13177 524 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 TSR1Q2NL82 804 aaKnown RBP17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 TWF2Q6IBS0 349 aaKnown RBP17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 ANKRD33Q7Z3H0 272 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 TMEM139Q8IV31 216 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 CD302Q8IX05 232 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 SEMA4DQ92854 862 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 BAG1Q99933 345 aaPredicted RBP17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 PLEKHA5Q9HAU0 1116 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 NLRC4Q9NPP4 1024 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 SNTG2Q9NY99 539 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 APEX2Q9UBZ4 518 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 ZKSCAN5Q9Y2L8 839 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 DAAM1Q9Y4D1 1078 aa17.24■□□□□ 0.35
SNRPD3-201ENST00000215829 TLR3O15455 904 aaKnown RBP17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 FECHP22830 423 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 ATN1P54259 1190 aaPredicted RBP17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 BFSP2Q13515 415 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 C1orf53Q5VUE5 145 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 RRAGAQ7L523 313 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 EFCAB13Q8IY85 973 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 FAM84AQ96KN4 292 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 NAA15Q9BXJ9 866 aaKnown RBP17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 NUCKS1Q9H1E3 243 aaKnown RBP17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 FHOD1Q9Y613 1164 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 RBAK-RBAKDNI3L0D1 243 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 PQBP1O60828 265 aaKnown RBP17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 LRRN2O75325 713 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 ZSCAN20P17040 1043 aaPredicted RBP17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 CAPN2P17655 700 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 YARSP54577 528 aaKnown RBP17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 BIRC3Q13489 604 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 IQCEQ6IPM2 695 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 PHLDB3Q6NSJ2 640 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 PDXDC1Q6P996 788 aa17.23■□□□□ 0.35
SNRPD3-201ENST00000215829 DIS3LQ8TF46 1054 aaKnown RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms