RNA–Protein interactions for RNA: ENST00000215793.12

SF3A1-201, Transcript of splicing factor 3a subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3A1, Length 5,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-201ENST00000215793 DPYDQ12882 1025 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 OR9Q1Q8NGQ5 310 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 RBM46Q8TBY0 533 aaKnown RBP14.31□□□□□ -0.12
SF3A1-201ENST00000215793 ZCCHC17Q9NP64 241 aaKnown RBP14.31□□□□□ -0.12
SF3A1-201ENST00000215793 UCHL3P15374 230 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 ITIH2P19823 946 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 RBP5P82980 135 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 TRADDQ15628 312 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 MFSD14CQ5VZR4 134 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 LRRC1Q9BTT6 524 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 EML4Q9HC35 981 aaKnown RBP14.31□□□□□ -0.12
SF3A1-201ENST00000215793 PNPLA6Q8IY17 1366 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 UBA6A0AVT1 1052 aaPredicted RBP14.31□□□□□ -0.12
SF3A1-201ENST00000215793 TRAPPC3O43617 180 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 FMO5P49326 533 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 SF3B3Q15393 1217 aaKnown RBP14.31□□□□□ -0.12
SF3A1-201ENST00000215793 ZNF526Q8TF50 670 aaPredicted RBP14.31□□□□□ -0.12
SF3A1-201ENST00000215793 DPF2Q92785 391 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 YY1AP1Q9H869 796 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 GALCP54803 685 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 UGP2Q16851 508 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 STRIP1Q5VSL9 837 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 ZNF668Q96K58 619 aaPredicted RBP14.31□□□□□ -0.12
SF3A1-201ENST00000215793 CRAMP1Q96RY5 1269 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 TRABDQ9H4I3 376 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 ECT2Q9H8V3 914 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 TUBE1Q9UJT0 475 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 DAGLAQ9Y4D2 1042 aa14.31□□□□□ -0.12
SF3A1-201ENST00000215793 MYCP01106 439 aaPredicted RBP14.3□□□□□ -0.12
SF3A1-201ENST00000215793 TXNP10599 105 aaKnown RBP14.3□□□□□ -0.12
SF3A1-201ENST00000215793 DDX5P17844 614 aaKnown RBP14.3□□□□□ -0.12
SF3A1-201ENST00000215793 KCNA1Q09470 495 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 TKFCQ3LXA3 575 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 ICE2Q659A1 982 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 CHP1Q99653 195 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 SENP7Q9BQF6 1050 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 AIPL1Q9NZN9 384 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 PCDHGB4Q9UN71 923 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 TNS3Q68CZ2 1445 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 ARHGAP10A1A4S6 786 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 ATXN8OSP0DMR3 200 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 CPB1P15086 417 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 RARS2Q5T160 578 aaKnown RBP14.3□□□□□ -0.12
SF3A1-201ENST00000215793 EFHBQ8N7U6 833 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 ICA1LQ8NDH6 482 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 DDX50Q9BQ39 737 aaKnown RBP14.3□□□□□ -0.12
SF3A1-201ENST00000215793 GPBP1L1Q9HC44 474 aaPredicted RBP14.3□□□□□ -0.12
SF3A1-201ENST00000215793 ARL2BPQ9Y2Y0 163 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 C3orf70A6NLC5 250 aaPredicted RBP14.3□□□□□ -0.12
SF3A1-201ENST00000215793 STXBP3O00186 592 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 PSMD3O43242 534 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 PHF2O75151 1096 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 ENTPD3O75355 529 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 PYGLP06737 847 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 TPI1P60174 286 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 SPATA21Q7Z572 469 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 RMDN1Q96DB5 314 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 EPC1Q9H2F5 836 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 MAP3K20Q9NYL2 800 aaKnown RBP14.3□□□□□ -0.12
SF3A1-201ENST00000215793 TJP2Q9UDY2 1190 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 NDUFB10O96000 172 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 HMGCS2P54868 508 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 SGSM1Q2NKQ1 1148 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 LRIG3Q6UXM1 1119 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 NAF1Q96HR8 494 aaKnown RBP14.3□□□□□ -0.12
SF3A1-201ENST00000215793 CYP4F11Q9HBI6 524 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 TET3O43151 1660 aa14.3□□□□□ -0.12
SF3A1-201ENST00000215793 PDGFRAP16234 1089 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 KCNA2P16389 499 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 PIGHQ14442 188 aaPredicted RBP14.29□□□□□ -0.12
SF3A1-201ENST00000215793 NAA30Q147X3 362 aaPredicted RBP14.29□□□□□ -0.12
SF3A1-201ENST00000215793 CEP70Q8NHQ1 597 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 SLC35G2Q8TBE7 412 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 TBC1D16Q8TBP0 767 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 SCFD1Q8WVM8 642 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 RMDN2Q96LZ7 410 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 PLEKHA5Q9HAU0 1116 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 NDFIP2Q9NV92 336 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 FLT1P17948 1338 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 NRKQ7Z2Y5 1582 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 ATP9BO43861 1147 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 IL10P22301 178 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 P3H1Q32P28 736 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 TAS2R42Q7RTR8 314 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 AGAP1Q9UPQ3 857 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 LAMC1P11047 1609 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 ADCY10Q96PN6 1610 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 SMAPO00193 183 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 FGFR4P22455 802 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 NAB2Q15742 525 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 RNF135Q8IUD6 432 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 DDIASQ8IXT1 998 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 CATSPER1Q8NEC5 780 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 SEPT1Q8WYJ6 367 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 PGBD4Q96DM1 585 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 SGSM3Q96HU1 749 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 RBM15Q96T37 977 aaKnown RBP eCLIP14.29□□□□□ -0.12
SF3A1-201ENST00000215793 REEP2Q9BRK0 252 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 MKNK1Q9BUB5 465 aa14.29□□□□□ -0.12
SF3A1-201ENST00000215793 STX18Q9P2W9 335 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms