RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 SEPT7Q16181 437 aaKnown RBP21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 C11orf63Q6NUN7 778 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 LRRC8CQ8TDW0 803 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 SYT15Q9BQS2 421 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 UBN1Q9NPG3 1134 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 PAPOLBQ9NRJ5 636 aaKnown RBP21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 PRKAG3Q9UGI9 489 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 ZMYM2Q9UBW7 1377 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 FAM47DPA6NHR8 397 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 CDH16O75309 829 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 TSNAXIP1Q2TAA8 658 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 RNF220Q5VTB9 566 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 ANKRD35Q8N283 1001 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 SYT11Q9BT88 431 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 MYH14Q7Z406 1995 aaKnown RBP21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 SNHG28P0DPA3 235 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 MAPK4P31152 587 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 POLGP54098 1239 aaPredicted RBP21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 TAF1BQ53T94 588 aaPredicted RBP21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 PPP1R21Q6ZMI0 780 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 DNAJC9Q8WXX5 260 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 SAYSD1Q9NPB0 183 aa21.41■■□□□ 1.02
PPP1R3F-201ENST00000055335 TPBGLP0DKB5 382 aa21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 RRM1P23921 792 aa21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 TNFAIP8L3Q5GJ75 292 aa21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 HHATQ5VTY9 493 aa21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 UCMAQ8WVF2 138 aa21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 DHX38Q92620 1227 aaKnown RBP21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 CBWD1Q9BRT8 395 aa21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 C12orf65Q9H3J6 166 aaKnown RBP21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 ITIH2P19823 946 aa21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 ZNF720Q7Z2F6 126 aa21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 HERPUD2Q9BSE4 406 aa21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 CYP39A1Q9NYL5 469 aa21.4■■□□□ 1.02
PPP1R3F-201ENST00000055335 GOLGA8RI6L899 631 aa21.39■■□□□ 1.02
PPP1R3F-201ENST00000055335 NT5C2P49902 561 aa21.39■■□□□ 1.02
PPP1R3F-201ENST00000055335 KIF22Q14807 665 aa21.39■■□□□ 1.02
PPP1R3F-201ENST00000055335 KLF6Q99612 283 aaPredicted RBP21.39■■□□□ 1.02
PPP1R3F-201ENST00000055335 PLVAPQ9BX97 442 aa21.39■■□□□ 1.02
PPP1R3F-201ENST00000055335 DENND2DQ9H6A0 471 aaPredicted RBP21.39■■□□□ 1.02
PPP1R3F-201ENST00000055335 GOLGA8SH3BPF8 625 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 GOLGA8MH3BSY2 632 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 GAP43P17677 238 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 IZUMO3Q5VZ72 239 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 ZC3H18Q86VM9 953 aaKnown RBP21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 RBM15Q96T37 977 aaKnown RBP eCLIP21.39■■□□□ 1.012e-6■■■■□ 25.4
PPP1R3F-201ENST00000055335 A0A0G2JND7 137 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 CFAP69A5D8W1 941 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 BMP3P12645 472 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 SIX1Q15475 284 aaPredicted RBP21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 FAM182BQ5T319 152 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 RNF43Q68DV7 783 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 RFWD3Q6PCD5 774 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 MTDHQ86UE4 582 aaKnown RBP21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 USH1CQ9Y6N9 552 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 NHSL1Q5SYE7 1610 aa21.39■■□□□ 1.01
PPP1R3F-201ENST00000055335 ALAS1P13196 640 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 PAPOLAP51003 745 aaKnown RBP21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 VAMP7P51809 220 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 KLC1Q07866 573 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 RCN2Q14257 317 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 SCYL3Q8IZE3 742 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 ZFP69BQ9UJL9 534 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 GGA1Q9UJY5 639 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 SUGT1Q9Y2Z0 365 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 TP73O15350 636 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 GDF11O95390 407 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 GGPS1O95749 300 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 CCNB1P14635 433 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 PKN2Q16513 984 aaKnown RBP21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 BMT2Q1RMZ1 405 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 FBXO11Q86XK2 927 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 SLF2Q8IX21 1173 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 EPS8L1Q8TE68 723 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 LENG9Q96B70 501 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 HAUS1Q96CS2 278 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 OLFML3Q9NRN5 406 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 LAMB1P07942 1786 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 SLITRK3O94933 977 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 SNUPNO95149 360 aaKnown RBP21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 RPA3P35244 121 aaPredicted RBP21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 ZBTB16Q05516 673 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 GRAPQ13588 217 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 STXBP4Q6ZWJ1 553 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 GRAPLQ8TC17 118 aaPredicted RBP21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 AMNQ9BXJ7 453 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 TRABDQ9H4I3 376 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 WHRNQ9P202 907 aa21.38■■□□□ 1.01
PPP1R3F-201ENST00000055335 RALAP11233 206 aa21.37■■□□□ 1.01
PPP1R3F-201ENST00000055335 INHBEP58166 350 aa21.37■■□□□ 1.01
PPP1R3F-201ENST00000055335 EGFL6Q8IUX8 553 aa21.37■■□□□ 1.01
PPP1R3F-201ENST00000055335 ARHGEF35A5YM69 484 aa21.37■■□□□ 1.01
PPP1R3F-201ENST00000055335 MXI1P50539 228 aa21.37■■□□□ 1.01
PPP1R3F-201ENST00000055335 NFIAQ12857 509 aa21.37■■□□□ 1.01
PPP1R3F-201ENST00000055335 MKRN3Q13064 507 aaKnown RBP21.37■■□□□ 1.01
PPP1R3F-201ENST00000055335 AGGF1Q8N302 714 aaeCLIP21.37■■□□□ 1.01
PPP1R3F-201ENST00000055335 TRAIPQ9BWF2 469 aa21.37■■□□□ 1.01
PPP1R3F-201ENST00000055335 C2CD2Q9Y426 696 aa21.37■■□□□ 1.01
PPP1R3F-201ENST00000055335 FRMPD4Q14CM0 1322 aa21.37■■□□□ 1.01
PPP1R3F-201ENST00000055335 GAS7O60861 476 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms