RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 HAUS6Q7Z4H7 955 aa15□□□□□ -0.01
USH1C-201ENST00000005226 RPAINQ86UA6 219 aa15□□□□□ -0.01
USH1C-201ENST00000005226 CPA5Q8WXQ8 436 aa15□□□□□ -0.01
USH1C-201ENST00000005226 RUNDC3BQ96NL0 473 aa15□□□□□ -0.01
USH1C-201ENST00000005226 TGS1Q96RS0 853 aaKnown RBP15□□□□□ -0.01
USH1C-201ENST00000005226 LRRC19Q9H756 370 aa15□□□□□ -0.01
USH1C-201ENST00000005226 NINJ2Q9NZG7 142 aa15□□□□□ -0.01
USH1C-201ENST00000005226 SIPA1L1O43166 1804 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 SPATA31A6Q5VVP1 1343 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 TTC4O95801 387 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 KRT5P13647 590 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 FOXN2P32314 431 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 ZNF268Q14587 947 aaPredicted RBP14.99□□□□□ -0.01
USH1C-201ENST00000005226 RHBDF2Q6PJF5 856 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 MIER3Q7Z3K6 550 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 ERICH1Q86X53 443 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 IL31RAQ8NI17 732 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 KCNV2Q8TDN2 545 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 TAS1R2Q8TE23 839 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 CKAP2Q8WWK9 683 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 MRRFQ96E11 262 aaKnown RBP14.99□□□□□ -0.01
USH1C-201ENST00000005226 ACCSQ96QU6 501 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 ROPN1BQ9BZX4 212 aaPredicted RBP14.99□□□□□ -0.01
USH1C-201ENST00000005226 ROPN1Q9HAT0 212 aaPredicted RBP14.99□□□□□ -0.01
USH1C-201ENST00000005226 ANAPC5Q9UJX4 755 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 NAALADL1Q9UQQ1 740 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 CEP83Q9Y592 693 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 UBE4BO95155 1302 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 C10orf71Q711Q0 1435 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 FSCN2O14926 492 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 SPAG7O75391 227 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 GBP1P32455 592 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 STX2P32856 288 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 SOX10P56693 466 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 BNIP1Q12981 228 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 CYP4F22Q6NT55 531 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 ANKLE1Q8NAG6 615 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 SPOCK2Q92563 424 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 CSRNP1Q96S65 589 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 LARSQ9P2J5 1176 aaKnown RBP14.99□□□□□ -0.01
USH1C-201ENST00000005226 ZHX2Q9Y6X8 837 aa14.99□□□□□ -0.01
USH1C-201ENST00000005226 CFAP73A6NFT4 308 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 GZMAP12544 262 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 MAPK4P31152 587 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 SPP2Q13103 211 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 CAPN12Q6ZSI9 719 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 SLC17A8Q8NDX2 589 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 L3MBTL3Q96JM7 780 aaPredicted RBP14.98□□□□□ -0.01
USH1C-201ENST00000005226 SERPINB12Q96P63 405 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 USP20Q9Y2K6 914 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 GRIN3BO60391 1043 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 TOM1O60784 492 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 MTA2O94776 668 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 VIL1P09327 827 aaKnown RBP14.98□□□□□ -0.01
USH1C-201ENST00000005226 ADSSP30520 456 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 RNASELQ05823 741 aaKnown RBP14.98□□□□□ -0.01
USH1C-201ENST00000005226 PLA2G4FQ68DD2 849 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 FMNL3Q8IVF7 1028 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 HELQQ8TDG4 1101 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 SHC3Q92529 594 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 PRMT6Q96LA8 375 aaPredicted RBP14.98□□□□□ -0.01
USH1C-201ENST00000005226 IDI2Q9BXS1 227 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 WHRNQ9P202 907 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 GTF3C4Q9UKN8 822 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 C15orf41Q9Y2V0 281 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 ARL2BPQ9Y2Y0 163 aa14.98□□□□□ -0.01
USH1C-201ENST00000005226 TCP10L2B9ZVM9 353 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 GJB6O95452 261 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 RFX1P22670 979 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 RRM1P23921 792 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 MFAP3P55082 362 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 TCEAL1Q15170 157 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 UGCGQ16739 394 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 LMBRD2Q68DH5 695 aaPredicted RBP14.97□□□□□ -0.01
USH1C-201ENST00000005226 ANKS1BQ7Z6G8 1248 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 CROCCP2Q86T23 111 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 ECHDC2Q86YB7 292 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 ZNF622Q969S3 477 aaKnown RBP eCLIP14.97□□□□□ -0.01
USH1C-201ENST00000005226 SNF8Q96H20 258 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 AGBL1Q96MI9 1066 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 EBF2Q9HAK2 575 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 KLHL11Q9NVR0 708 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 ITIH2P19823 946 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 RARRES1P49788 294 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 CDR2Q01850 454 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 TMED2Q15363 201 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 SNRNP35Q16560 246 aaKnown RBP14.97□□□□□ -0.01
USH1C-201ENST00000005226 C12orf50Q8NA57 414 aaPredicted RBP14.97□□□□□ -0.01
USH1C-201ENST00000005226 DDX1Q92499 740 aaKnown RBP14.97□□□□□ -0.01
USH1C-201ENST00000005226 ZNF570Q96NI8 536 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 TMEM206Q9H813 350 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 ARHGEF10LQ9HCE6 1279 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 KCNH7Q9NS40 1196 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 COL20A1Q9P218 1284 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 USP21Q9UK80 565 aa14.97□□□□□ -0.01
USH1C-201ENST00000005226 CFHP08603 1231 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 RALAP11233 206 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 ATF2P15336 505 aa14.96□□□□□ -0.01
USH1C-201ENST00000005226 SSR1P43307 286 aaKnown RBP14.96□□□□□ -0.01
USH1C-201ENST00000005226 RIPK1Q13546 671 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms