RNA–Protein interactions for RNA: ENSMUST00000112298.9

Ssh1-202, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 5,584 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-202ENSMUST00000112298 Add1Q9QYC0 735 aaKnown RBP13.09□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Pcdh11xF6ZNL5 1338 aa13.09□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Zc3h7bF8VPP8 982 aaKnown RBP13.08□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Gm5152L7N200 190 aa13.08□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Nrg3O35181 713 aa13.08□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Serpind1P49182 478 aa13.08□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Serpina1eQ00898 413 aa13.08□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Foxn3Q499D0 457 aa13.08□□□□□ -0.31
Ssh1-202ENSMUST00000112298 PtsQ9R1Z7 144 aa13.08□□□□□ -0.31
Ssh1-202ENSMUST00000112298 Vmn2r87E9PZX4 848 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Ap1s3Q7TN05 154 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 A430089I19RikQ8C9W1 407 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Cpa5Q8R4H4 436 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 ChiaQ91XA9 473 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Klhl28Q9CR40 571 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Trp53inp1Q9QXE4 239 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Myo3aQ8K3H5 1613 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Serpina16D3Z660 418 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Srp72F8VQC1 671 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Exosc10P56960 887 aaKnown RBP13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Zdhhc9P59268 364 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Ppp4r3cQ3V0Y1 813 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Nod1Q8BHB0 953 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 PdxkQ8K183 312 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Tbc1d22aQ8R5A6 516 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Tc2nQ91XT6 489 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Trpd52l3Q9CQ14 231 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Flt1P35969 1333 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Tulp4Q9JIL5 1547 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Adamts12Q811B3 1600 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Card9A2AIV8 536 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Nmt2O70311 529 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Psmb9P28076 219 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Cyp2c67Q569X9 491 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Rccd1Q8BTU7 377 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Ano4Q8C5H1 955 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Actl9Q8CG27 415 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Satb2Q8VI24 733 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Nmrk1Q91W63 195 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Eif3hQ91WK2 352 aaKnown RBP13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Mettl7bQ9DD20 244 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 M1apQ9Z0E1 529 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Krt16Q9Z2K1 469 aa13.08□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Gemin5Q8BX17 1502 aaKnown RBP13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Gm13084A2A8N0 494 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Hsf3D0VYS2 492 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Hmgxb3G3X9M3 1254 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Speer4eK7N6S8 255 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Slc16a1P53986 493 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Arhgap44Q5SSM3 814 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Srp68Q8BMA6 625 aaKnown RBP13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Rd3Q8BRE0 195 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Scfd2Q8BTY8 684 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 PreplQ8C167 725 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Cog3Q8CI04 820 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 BfarQ8R079 450 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Nsmce3Q9CPR8 279 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Olfr711Q9EPG2 314 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Cd2apQ9JLQ0 637 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Kank3Q9Z1P7 791 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Tarbp1E9Q368 1579 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Ifi206G3UZV2 921 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Faf2Q3TDN2 445 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Wdr41Q3UDP0 460 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Oog4Q4G0C7 502 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Ms4a5Q810P8 197 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Q8BP99 230 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Atp13a1Q9EPE9 1200 aaKnown RBP13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 NfkbizQ9EST8 728 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 PtpreP49446 699 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 RasefQ5RI75 627 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Osbpl2Q8BX94 484 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Dnajc5gQ8C632 165 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Art3Q8R2G4 371 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Ccdc80Q8R2G6 949 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Tcp10bE9PYJ0 438 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Psma2P49722 234 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Kdm7aQ3UWM4 940 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Fam183bQ5NC57 135 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Ddx18Q8K363 660 aaKnown RBP13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Dnajc28Q8VCE1 385 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 ScgnQ91WD9 276 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Zmynd10Q99ML0 440 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Tex12Q9CR81 123 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Ddx56Q9D0R4 546 aaKnown RBP13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Large1Q9Z1M7 756 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 4930469K13RikA0A286YDB2 92 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 AK157302I3ITR1 129 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Gm7942L7N277 499 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Psma3O70435 255 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Mucl2P02815 138 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Rrp36Q3UFY0 244 aaKnown RBP13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Acap2Q6ZQK5 770 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Cnot3Q8K0V4 751 aaKnown RBP13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Mmgt1Q8K273 131 aaKnown RBP13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Ubxn2aQ99KJ0 258 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Hspbp1Q99P31 357 aaKnown RBP13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Isca1Q9D924 129 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Lrrc46Q9DAP0 323 aa13.07□□□□□ -0.32
Ssh1-202ENSMUST00000112298 Sema4dO09126 861 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms