RNA–Protein interactions for RNA: ENSMUST00000111180.8

Trim50-202, Transcript of E3 ubiquitin-protein ligase TRIM50, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim50, Length 1,456 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50-202ENSMUST00000111180 Mageb3Q9D2H4 330 aa13.41□□□□□ -0.26
Trim50-202ENSMUST00000111180 Serpina9Q9D7D2 418 aa13.41□□□□□ -0.26
Trim50-202ENSMUST00000111180 H2-OaQ9QWV1 250 aa13.41□□□□□ -0.26
Trim50-202ENSMUST00000111180 JmyQ9QXM1 983 aa13.41□□□□□ -0.26
Trim50-202ENSMUST00000111180 Arid2E9Q7E2 1828 aa13.41□□□□□ -0.26
Trim50-202ENSMUST00000111180 Dock3Q8CIQ7 2027 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Gm8298J3QPI0 401 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Becn1O88597 448 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Chrna1P04756 457 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Tap2P36371 702 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Aldh2P47738 519 aaKnown RBP13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Sox1P53783 391 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 SPINDOCQ05AH6 381 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 L1td1Q587J6 782 aaKnown RBP13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Slc26a2Q62273 739 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Vps72Q62481 368 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Styk1Q6J9G1 429 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Fmnl3Q6ZPF4 1028 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Tspan18Q80WR1 248 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Ddrgk1Q80WW9 315 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Ccz1Q8C1Y8 480 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Klhl11Q8CE33 709 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Glis1Q8K1M4 789 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Vwa1Q8R2Z5 415 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Ppp1r16bQ8VHQ3 568 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Necab2Q91ZP9 389 aa13.4□□□□□ -0.26
Trim50-202ENSMUST00000111180 Col6a3E9PWQ3 3284 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Adamts9E9PUN6 1931 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Ttc13A0A1L1SSC7 844 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Ptchd4B9EKX1 904 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Gm8909G3UXE9 396 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Wnt7bP28047 349 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Ccr5P51682 354 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Ano9P86044 747 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Carmil2Q3V3V9 1296 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Zbtb8osQ505B7 168 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Klra6Q60653 266 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Bag1Q60739 355 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Dlg4Q62108 724 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Dusp11Q6NXK5 321 aaKnown RBP13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Dnph1Q80VJ3 173 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Mapk15Q80Y86 549 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Maip1Q8BHE8 291 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Zc3h6Q8BYK8 1177 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 4931406P16RikQ8C5X1 1059 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Znf467Q8JZL0 594 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Wdr11Q8K1X1 1223 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Ap3m2Q8R2R9 418 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Atp1a1Q8VDN2 1023 aaKnown RBP13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Rem2Q8VEL9 341 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Clstn3Q99JH7 956 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Mageb16Q9CWV4 363 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Med10Q9CXU0 135 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Igdcc4Q9EQS9 1252 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Cse1lQ9ERK4 971 aaKnown RBP13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Tnfrsf10bQ9QZM4 381 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Prpf40aQ9R1C7 953 aaKnown RBP13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 Htatip2Q9Z2G9 242 aa13.39□□□□□ -0.27
Trim50-202ENSMUST00000111180 PcntP48725 2898 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Slc16a6B1AT66 607 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Znf568E9PYI1 671 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Dcpp3L7N259 170 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Sema4dO09126 861 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Serpinc1P32261 465 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Ifnar1P33896 590 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Cxcl12P40224 93 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Ppp3caP63328 521 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Kcnd1Q03719 651 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Git1Q68FF6 770 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 FAM120AQ6A0A9 1112 aaKnown RBP13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Epn1Q80VP1 575 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 RimklbQ80WS1 387 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Acad11Q80XL6 779 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Slc2a12Q8BFW9 622 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Dnm3Q8BZ98 863 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Fam160b1Q8CDM8 764 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Cdk17Q8K0D0 523 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Ablim1Q8K4G5 861 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Tcf25Q8R3L2 676 aaKnown RBP13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Eml3Q8VC03 897 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Cbwd1Q8VEH6 393 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Pcdha2Q91Y17 948 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Cwh43Q91YL7 699 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Plagl2Q925T4 496 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Clp1Q99LI9 425 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Fam111aQ9D2L9 613 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Nol7Q9D7Z3 254 aaKnown RBP13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 B4galt5Q9JMK0 388 aa13.38□□□□□ -0.27
Trim50-202ENSMUST00000111180 Ttll8A4Q9F1 832 aa13.37□□□□□ -0.27
Trim50-202ENSMUST00000111180 Cnbd1B1AWM0 430 aa13.37□□□□□ -0.27
Trim50-202ENSMUST00000111180 Olfr456B2RT27 312 aa13.37□□□□□ -0.27
Trim50-202ENSMUST00000111180 Hnrnph3D3Z3N4 346 aaKnown RBP13.37□□□□□ -0.27
Trim50-202ENSMUST00000111180 Vmn2r55G3UWZ4 781 aa13.37□□□□□ -0.27
Trim50-202ENSMUST00000111180 Vmn2r53L7N473 806 aa13.37□□□□□ -0.27
Trim50-202ENSMUST00000111180 Smpd2O70572 419 aa13.37□□□□□ -0.27
Trim50-202ENSMUST00000111180 Kcnn2P58390 839 aa13.37□□□□□ -0.27
Trim50-202ENSMUST00000111180 Arf4P61750 180 aa13.37□□□□□ -0.27
Trim50-202ENSMUST00000111180 Acot6Q32Q92 419 aa13.37□□□□□ -0.27
Trim50-202ENSMUST00000111180 Panx2Q6IMP4 677 aa13.37□□□□□ -0.27
Trim50-202ENSMUST00000111180 RragaQ80X95 313 aa13.37□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms