RNA–Protein interactions for RNA: ENSMUST00000056925.15

Col6a3-201, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 10,106 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-201ENSMUST00000056925 Hmbox1Q8BJA3 419 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Rps6kc1Q8BLK9 1056 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Pnma3Q8JZW8 466 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 OoepQ9CWE6 164 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Terb2Q9D494 218 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Ddx20Q9JJY4 825 aaKnown RBP10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gm4841E9QAA8 417 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Lrig2Q52KR2 1054 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Tmem120aQ8C1E7 343 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Ehd3Q9QXY6 535 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Lrriq1Q0P5X1 1673 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 AatkQ80YE4 1365 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gm43518A0A0G2JGB6 165 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Oip5A2AQ14 241 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gm3383J3QQ59 259 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gm3164L7N2B9 238 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gm3239L7N2D9 227 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Arhgap45Q3TBD2 1116 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Map3k12Q60700 888 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Plekha8Q80W71 519 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Plcl2Q8K394 1128 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 TfamP40630 243 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 PltpP55065 493 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 P3h1Q3V1T4 739 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Afap1l2Q5DTU0 825 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gm5622Q810Q0 167 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 ThemisQ8BGW0 636 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Kcnv2Q8CFS6 562 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gga1Q8R0H9 635 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Rnf6Q9DBU5 667 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Lrrc32G3XA59 663 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Tpp1O89023 562 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Pkn1P70268 946 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Krt86P97861 486 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Tspyl5Q69ZB3 406 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Pramel6Q810Y9 485 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gtse1Q8R080 741 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 RereQ80TZ9 1558 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Aoc3O70423 765 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Dis3Q9CSH3 958 aaKnown RBP10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Kank3Q9Z1P7 791 aa10.89□□□□□ -0.67
Col6a3-201ENSMUST00000056925 4930430A15RikQ05AC5 485 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Trim67Q505D9 768 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Utp14bQ6EJB6 756 aaKnown RBP10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Fbxo28Q8BIG4 368 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Pgm3Q9CYR6 542 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Krt34Q9D646 392 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 ArcQ9WV31 396 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 1700029H14RikE9PY36 240 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gsta1P13745 223 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gsta1Q6P8Q0 223 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Eme1Q8BJW7 570 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 CopaQ8CIE6 1224 aaKnown RBP10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Vps39Q8R5L3 886 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Sgsm3Q8VCZ6 750 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 CbsQ91WT9 561 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Chordc1Q9D1P4 331 aaKnown RBP10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gpaa1Q9WTK3 621 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Gm3187M0QWW3 260 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Ctnnd2O35927 1247 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Tom1l2Q5SRX1 507 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Pard3bQ9CSB4 1203 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Adgrf5G5E8Q8 1348 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Kpna4O35343 521 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Tom1O88746 492 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Epb41l4aP52963 686 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Rasip1Q3U0S6 961 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Slc13a5Q67BT3 572 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Osbpl6Q8BXR9 959 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Psma4Q9R1P0 261 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Kdm3bQ6ZPY7 1562 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 4930469K13RikA0A286YDB2 92 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Serpinb3cA2RSF9 386 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Ankle1A8VU90 534 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 IppP28575 584 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Madcam1Q61826 405 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Asb2Q8K0L0 634 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Idh3bQ91VA7 384 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Pdk3Q922H2 415 aaKnown RBP10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Rgs10Q9CQE5 181 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Anapc7Q9WVM3 565 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 CrnnD3YUU6 520 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Cyp4f17G3UW78 524 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Ifi206G3UZV2 921 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Map4k1P70218 827 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 RnaselQ05921 735 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Dcun1d2Q8BZJ7 259 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Terb1Q8C0V1 768 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 H2afy2Q8CCK0 372 aaKnown RBP10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Prmt3Q922H1 532 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Cyp4f16Q99N17 524 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Lyrm1Q9CQB7 122 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 PpidQ9CR16 370 aaKnown RBP10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 CpvlQ9D3S9 478 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Fam227aQ9D3V8 625 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Tnfrsf10bQ9QZM4 381 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Map3k15A2AQW0 1331 aa10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 SarsP26638 512 aaKnown RBP10.88□□□□□ -0.67
Col6a3-201ENSMUST00000056925 Nedd8P29595 81 aa10.88□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms