RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Trpv6Q91WD2 767 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Actl6bQ99MR0 426 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Uqcc2Q9CQY6 136 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm1141B9EJU1 475 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 E2f3O35261 457 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 NfycP70353 335 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 C130026I21RikQ8C898 291 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Sav1Q8VEB2 386 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Fam227bQ9D518 532 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Armc8Q9DBR3 673 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Trim3Q9R1R2 744 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Akt3Q9WUA6 479 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Shcbp1Q9Z179 668 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Cacna2d3Q9Z1L5 1091 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Krt1P04104 637 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Wfs1P56695 890 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 MpripP97434 1024 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Nlrp14Q6B966 993 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Oog2Q7TPX8 476 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rsbn1Q80T69 795 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pcsk9Q80W65 694 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ppm1mQ8BU27 406 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 CenpuQ8C4M7 410 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Setd6Q9CWY3 473 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Ints12Q9D168 461 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Cdkl2Q9QUK0 568 aa9.47□□□□□ -0.89
Clcn3-202ENSMUST00000056508 UprtB1AVZ0 310 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 SpibO35906 267 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Prkar2bP31324 416 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Shmt1P50431 478 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Cpne7Q0VE82 557 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 H2afy2Q8CCK0 372 aaKnown RBP9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Pcdha12Q91Y18 950 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Abcb8Q9CXJ4 717 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Mettl18Q9CZ09 362 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Mfsd10Q9D2V8 456 aaKnown RBP9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Eif2ak3Q9Z2B5 1114 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Spag9Q58A65 1321 aaKnown RBP9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Mamdc4A2AJA7 1228 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Sult6b2B7ZWN4 290 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Zc3h7aE9PWW6 970 aaKnown RBP9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Nmt1O70310 496 aaKnown RBP9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 SsbP32067 415 aaKnown RBP9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Smad4P97471 551 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Reep5Q60870 185 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Atp4aQ64436 1033 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Capn11Q6J756 714 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Lrrd1Q8C0R9 853 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Rfx6Q8C7R7 927 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Snx30Q8CE50 437 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 LgsnQ8CIX8 563 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Acap1Q8K2H4 740 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Kif2cQ922S8 721 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 ErmapQ9JLN5 566 aa9.46□□□□□ -0.89
Clcn3-202ENSMUST00000056508 Gm11634A0A1B0GSX1 172 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Serpinb3cA2RSF9 386 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 L1camP11627 1260 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tcf4Q60722 670 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Capn3Q64691 821 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 CltbQ6IRU5 229 aaKnown RBP9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Sp140Q6NSQ5 534 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ankzf1Q80UU1 748 aaKnown RBP9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Q8BP99 230 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 SntnQ8C9X1 147 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pcdhga10Q91XY9 930 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Bco2Q99NF1 532 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tnfrsf22Q9ER62 198 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Krt27Q9Z320 448 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gm6121L7MUF1 212 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Anxa6P14824 673 aaKnown RBP9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Rag1P15919 1040 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Eno3P21550 434 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Teddm2Q208S0 260 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Wdr41Q3UDP0 460 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pacs2Q3V3Q7 862 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 MENTQ569E4 350 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 E2f7Q6S7F2 904 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Dtnbp1Q91WZ8 352 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Rgs19Q9CX84 216 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Snx7Q9CY18 387 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tbc1d7Q9D0K0 293 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pard6gQ9JK84 382 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 EdarQ9R187 448 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 NfkbiaQ9Z1E3 314 aa9.46□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Fam171a2A2A699 822 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tnni3P48787 211 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pou2f2Q00196 463 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Zmym1Q3TJB1 983 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 CttnQ60598 546 aaKnown RBP9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Krr1Q8BGA5 380 aaKnown RBP9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Adcy4Q91WF3 1077 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 AslQ91YI0 464 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 NwcQ9CQI4 244 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Tmed11Q9D2R4 215 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Trim54Q9ERP3 366 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Gprasp1Q5U4C1 1347 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pla2g6P97819 807 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Pde12Q3TIU4 608 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Zranb3Q6NZP1 1069 aa9.45□□□□□ -0.9
Clcn3-202ENSMUST00000056508 Ints6Q6PCM2 883 aa9.45□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 77.5 ms