RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Rpf2Q9JJ80 306 aaKnown RBP12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Cacna2d3Q9Z1L5 1091 aa12.6□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ppfia4B8QI36 1187 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rad51ap2G3UW63 976 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Fam207aP58468 219 aaKnown RBP12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Prkag3Q8BGM7 489 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Tada2aQ8CHV6 443 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Pdik1lQ8QZR7 341 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Zmynd8A2A484 1235 aaKnown RBP12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mms22lB1AUR6 1238 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Lta4hP24527 611 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Slc1a1P51906 523 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 RnaselQ05921 735 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 ZbbxQ0P5X5 716 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Atp13a4Q5XF90 1193 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Zfp943Q6NZP4 507 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Entpd3Q8BFW6 529 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ttc1Q91Z38 292 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ugp2Q91ZJ5 508 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 NonoQ99K48 473 aaKnown RBP12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gimap3Q99MI6 301 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mageb3Q9D2H4 330 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 SftpbP50405 377 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ephb4P54761 987 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Nipa1Q8BHK1 323 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Senp7Q8BUH8 1037 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Fsd1lQ8BYN5 507 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 LgsnQ8CIX8 563 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Fam133bQ9CVI2 245 aaKnown RBP12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 ArpinQ9D0A3 226 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Fam205aA2APU8 1308 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Nova2D3YVV7 556 aaKnown RBP12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Actn4P57780 912 aaKnown RBP12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ifnl2Q4VK74 193 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ankrd6Q69ZU8 712 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Thnsl1Q8BH55 747 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Drd5Q8BLD9 478 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Zc3h6Q8BYK8 1177 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Unc45bQ8CGY6 931 aaKnown RBP12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 PdgfdQ925I7 370 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rrp15Q9CYX7 281 aaKnown RBP12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Olfr711Q9EPG2 314 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 CluhQ5SW19 1315 aa12.59□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Gm5737A0A140LI11 423 aa12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mindy4b-psA0A1W2P7H6 457 aa12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Rad54lP70270 747 aa12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 IqcmQ149I8 489 aa12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 LbrQ3U9G9 626 aaKnown RBP12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Brip1Q5SXJ3 1174 aa12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Mcf2lQ64096 1149 aa12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Usp17leQ7M764 540 aa12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Kank2Q8BX02 843 aa12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Ifi205aQ8CGE8 404 aa12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Fam49bQ921M7 324 aa12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 Trpv2Q9WTR1 756 aa12.58□□□□□ -0.39
Pcif1-201ENSMUST00000041643 GabreA2AMW3 916 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Kcng1A2BDX4 514 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mxi1P50540 228 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mnat1P51949 309 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Nr2c1Q505F1 590 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Usp13Q5BKP2 858 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Atg9bQ6EBV9 922 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pgrmc2Q80UU9 217 aaKnown RBP12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pcdhgb4Q91XX6 912 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 CacybpQ9CXW3 229 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tiam2Q6ZPF3 1715 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Osbpl7A2A716 963 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Taf4bG5E8Z2 855 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pgk2P09041 417 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Arl4cP61208 192 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Nfe2l2Q60795 597 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Bcar1Q61140 874 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Nsun6Q7TS68 476 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mageb18Q8BQR7 327 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 GhdcQ99J23 532 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ddx56Q9D0R4 546 aaKnown RBP12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 GOLGA7BQ9D428 167 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tlr5Q9JLF7 859 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gbp2Q9Z0E6 589 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Etv6P97360 485 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Kctd16Q5DTY9 427 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Armc6Q8BNU0 468 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Uba3Q8C878 462 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ephb1Q8CBF3 984 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Krt16Q9Z2K1 469 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tnip3A0A1D5RMN0 279 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Proca1B0QZF7 307 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Krt10P02535 570 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 AaasP58742 546 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Wdr41Q3UDP0 460 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tmem117Q8BH18 514 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Rfx6Q8C7R7 927 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Stap2Q8R0L1 411 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 PlvapQ91VC4 438 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pcyox1Q9CQF9 505 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mrpl2Q9D773 306 aaKnown RBP12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ptf1aQ9QX98 324 aa12.58□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pitpnm2Q6ZPQ6 1335 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Acnat1A2AKK5 416 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Soat2O88908 525 aa12.57□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 31.6 ms