RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Vmn1r214Q8R279 367 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Zcchc18Q8VD24 393 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ubxn2aQ99KJ0 258 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rgs10Q9CQE5 181 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ddx39bQ9Z1N5 428 aaKnown RBP10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Zfp266E9Q2S7 604 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gm379J3QQ19 296 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Aldh5a1Q8BWF0 523 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tti1Q91V83 1085 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Cyp2c50Q91X77 490 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 MrrfQ9D6S7 262 aaKnown RBP10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Xpo7Q9EPK7 1087 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Pidd1Q9ERV7 915 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ggps1Q9WTN0 300 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Atp13a5Q3TYU2 1216 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ulbp1Q8HWA3 334 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mtmr4Q91XS1 1190 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Pcdha10Q91Y20 946 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tlcd1Q99JT6 247 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Txndc9Q9CQ79 226 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Fip1l1Q9D824 581 aaKnown RBP10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Habp4Q9JKS5 411 aaKnown RBP10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rhox3fA2ANE1 215 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 CiitaP79621 1155 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tmem120bQ3TA38 339 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Thrap3Q569Z6 951 aaKnown RBP10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Dnajc5gQ8C632 165 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 E4f1Q8CCE9 783 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Usp27Q8CEG8 438 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ciapin1Q8WTY4 309 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 RpainQ9CWY9 219 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tbk1Q9WUN2 729 aa10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rbm6S4R1W5 1118 aaKnown RBP10.36□□□□□ -0.75
Syne1-201ENSMUST00000041639 Kcng1A2BDX4 514 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rbbp7Q60973 425 aaKnown RBP10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gm7247Q6UY52 187 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ing3Q8VEK6 421 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Pcdha11Q91Y19 950 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Taf11Q99JX1 211 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Nudt12Q9DCN1 462 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tlr9Q9EQU3 1032 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Wdr19Q3UGF1 1341 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Pdcd11Q6NS46 1862 aaKnown RBP10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Serpinb3aG3X9V8 387 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Kifc3O35231 824 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Psmd14O35593 310 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Fgd3O88842 733 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Cst8P32766 142 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Kcna2P63141 499 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Fam89aQ14BJ1 175 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rnpc3Q3UZ01 514 aaKnown RBP10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Nr2c1Q505F1 590 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 WhammQ571B6 793 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 PighQ5M9N4 188 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 FntaQ61239 377 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Stx3Q64704 289 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Fam20aQ8CID3 541 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tdrd3Q91W18 743 aaKnown RBP10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Foxo4Q9WVH3 505 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 RecqlQ9Z129 648 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Tmem2Q5FWI3 1383 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Itsn2Q9Z0R6 1659 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Sdccag3A2AIW0 432 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Aff1O88573 1216 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Arhgap30Q640N3 1101 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Chmp2bQ8BJF9 213 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Kbtbd13Q8C828 458 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Lman1lQ8VCD3 505 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 PtsQ9R1Z7 144 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gemin5Q8BX17 1502 aaKnown RBP10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Depdc5P61460 1591 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Acnat1A2AKK5 416 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Men1O88559 611 aaKnown RBP10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 TxnP10639 105 aaKnown RBP10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Ccdc85bQ6PDY0 202 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Chn2Q80XD1 332 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Vcpip1Q8CDG3 1220 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 PudpQ9D5U5 234 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gipc2Q9Z2H7 314 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Krt16Q9Z2K1 469 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 L3mbtl1A2A5N8 826 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 4930444G20RikD3Z741 495 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rc3h1Q4VGL6 1130 aaKnown RBP10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Mrps31Q61733 384 aaKnown RBP10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 CtifQ6PEE2 600 aaKnown RBP10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Gucy2gQ6TL19 1100 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 GzmnQ920S1 248 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Kbtbd12Q9D618 625 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 NfkbiaQ9Z1E3 314 aa10.35□□□□□ -0.75
Syne1-201ENSMUST00000041639 Zfp626A0A0U1RQ84 676 aa10.34□□□□□ -0.75
Syne1-201ENSMUST00000041639 Dhx35A2ACQ1 703 aaKnown RBP10.34□□□□□ -0.75
Syne1-201ENSMUST00000041639 Rfx8D3YU81 596 aa10.34□□□□□ -0.75
Syne1-201ENSMUST00000041639 Zfand4D3Z3C6 739 aa10.34□□□□□ -0.75
Syne1-201ENSMUST00000041639 Kif6E9PX57 802 aa10.34□□□□□ -0.75
Syne1-201ENSMUST00000041639 Krt4P07744 525 aa10.34□□□□□ -0.75
Syne1-201ENSMUST00000041639 CnpP16330 420 aa10.34□□□□□ -0.75
Syne1-201ENSMUST00000041639 Cyp2d11P24457 504 aa10.34□□□□□ -0.75
Syne1-201ENSMUST00000041639 Fam160a1Q505K2 1081 aa10.34□□□□□ -0.75
Syne1-201ENSMUST00000041639 Sco1Q5SUC9 284 aa10.34□□□□□ -0.75
Syne1-201ENSMUST00000041639 Catsper3Q80W99 395 aa10.34□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 20.8 ms