RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Snrnp27Q8K194 155 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Yipf1Q91VU1 306 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ttc1Q91Z38 292 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Caln1Q9JJG7 219 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Mmrn2A6H6E2 943 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 YdjcQ14BV6 310 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rnf10Q3UIW5 804 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cnot7Q60809 285 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Sh3rf1Q69ZI1 892 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 C2cd2lQ80X80 706 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Snx30Q8CE50 437 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tdrd3Q91W18 743 aaKnown RBP12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Pcdha10Q91Y20 946 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Krt20Q9D312 431 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Serpina9Q9D7D2 418 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cst12Q9DAN8 128 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gm9774A0A0A6YVU8 407 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gm29133A0A1B0GT72 266 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Lmntd2Q0VET5 664 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Lrig3Q6P1C6 1117 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rapgef5Q8C0Q9 814 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Oxnad1Q8VE38 311 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Grhl1Q921D9 618 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Mphosph6Q9D1Q1 161 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rasgef1cQ9D300 466 aa12.01□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Usp35M0QWN7 1009 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Mdm4O35618 489 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Axin2O88566 840 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Pik3r1P26450 724 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ppp3caP63328 521 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 LxnP70202 222 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Fgfr4Q03142 799 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Chrna5Q2MKA5 467 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Map3k9Q3U1V8 1077 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 PRAG1Q571I4 1179 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ago4Q8CJF8 861 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ppp1r11Q8K1L5 131 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tnpo2Q99LG2 887 aaKnown RBP12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gpatch1Q9DBM1 930 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Usp29Q9ES63 869 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gm11549A0A286YD83 63 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Bpifb9bA2AJD1 591 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ripk2P58801 539 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ppp4cP97470 307 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Jdp2P97875 163 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cul4aQ3TCH7 759 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 A1cfQ5YD48 595 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Bpifb9aQ80XI7 591 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ttc39bQ8BYY4 617 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 A430089I19RikQ8C9W1 407 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Mill1Q8HWE7 395 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Hspbp1Q99P31 357 aaKnown RBP12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Mtmr2Q9Z2D1 643 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Speer3W4VSP1 261 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rap1gds1E9Q912 607 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cyp2j6O54750 501 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 DffaO54786 331 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Cav1P49817 178 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ccdc159Q8C963 411 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Slc18a1Q8R090 521 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Taf11Q99JX1 211 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Krt7Q9DCV7 457 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Banf1O54962 89 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 PrlP06879 226 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Mylk3Q3UIZ8 795 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gstt2Q61133 244 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Kcnv2Q8CFS6 562 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Olfr1502Q8VG66 316 aa12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Mrpl2Q9D773 306 aaKnown RBP12□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Itga9B8JK39 1036 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Qtrt2B8ZXI1 415 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Serpini1O35684 410 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rbp3P49194 1234 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Shox2P70390 331 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 CtsfQ9R013 462 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rrm1P07742 792 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 OtulinQ3UCV8 352 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Xlr3cQ61806 226 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 WlsQ6DID7 541 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Ntrk3Q6VNS1 825 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tasp1Q8R1G1 420 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gtf2h1Q9DBA9 547 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Slc26a4Q9R155 780 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 AgxtO35423 414 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 OatP29758 439 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Sstr1P30873 391 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Psmc4P54775 418 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 PhbP67778 272 aaKnown RBP11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Tmem65Q4VAE3 234 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Slc25a38Q91XD8 326 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Inpp4aQ9EPW0 939 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 AuhQ9JLZ3 314 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Kif9Q9WV04 790 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gm4985A2ALC6 410 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Serpinb3cA2RSF9 386 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Gm3095E9Q058 166 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Galnt4O08832 578 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Rad51bO35719 350 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 Atp9aO70228 1047 aa11.99□□□□□ -0.49
Topbp1-201ENSMUST00000035164 PorP37040 678 aa11.99□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 37.6 ms