RNA–Protein interactions for RNA: ENSMUST00000029480.8

Prpf38b-201, Transcript of Pre-mRNA-splicing factor 38B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prpf38b, Length 3,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38b-201ENSMUST00000029480 Znf697Q569E7 569 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Krt74Q6IFZ9 495 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Elac2Q80Y81 831 aaKnown RBP14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Ccdc28bQ8CEG5 200 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 IntS13Q8QZV7 732 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 PhykplQ8R1K4 467 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Atp2a1Q8R429 994 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Nr3c2Q8VII8 978 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Trex1Q91XB0 314 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Creb3l3Q91XE9 479 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Coa7Q921H9 231 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Ube2sQ921J4 223 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Drap1Q9D6N5 205 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Usp29Q9ES63 869 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Tmod2Q9JKK7 351 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Fzd9Q9R216 592 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Grk1Q9WVL4 564 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Kcnd2Q9Z0V2 630 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Smarcad1Q04692 1021 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 FancbQ5XJY6 703 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Mapk4Q6P5G0 583 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 NfrkbQ6PIJ4 1296 aaKnown RBP14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Tut1Q8R3F9 869 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Pcdhb12Q91Y07 789 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Lrp2bpQ9D4C6 346 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Eif3fQ9DCH4 361 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Tcirg1Q9JHF5 834 aa14.21□□□□□ -0.13
Prpf38b-201ENSMUST00000029480 Bpifb9bA2AJD1 591 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Gm44G3UW88 330 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Zfp105G3X9I0 524 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Kcnu1O54982 1121 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Fgl2P12804 432 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Msh2P43247 935 aaKnown RBP14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 YdjcQ14BV6 310 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Kctd19Q562E2 927 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 SpdyaQ5IBH7 310 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Cacna2d4Q5RJF7 1116 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Gpd2Q64521 727 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Bpifb9aQ80XI7 591 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Sun2Q8BJS4 731 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Chn1Q91V57 459 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Stx17Q9D0I4 301 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 B3galt4Q9Z0F0 371 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Pcdh15Q99PJ1 1943 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Dicer1Q8R418 1916 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Skint3A7TZF0 458 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Muc3aQ3U5A2 218 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Rnf180Q3U827 592 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Krt35Q497I4 455 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Abl2Q4JIM5 1182 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Naa35Q6PHQ8 725 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Zbtb5Q7TQG0 670 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Smndc1Q8BGT7 238 aaKnown RBP14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Pacs1Q8K212 961 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Spon1Q8VCC9 807 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Ccdc70Q9D9B0 223 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 RptorQ8K4Q0 1335 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Pex5O09012 639 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 MyocO70624 490 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Gap43P06837 227 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 EpoP07321 192 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Slc2a13Q3UHK1 637 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Fam185aQ7TPD2 378 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Ttc16Q8C1F5 767 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 3830403N18RikQ9D6C3 208 aa14.2□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Guca2bO09051 106 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Lire1P11260 357 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Sash1P59808 1230 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 RelaQ04207 549 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Zfp953Q3UPV7 304 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Q3V0E1 1183 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Dhx37Q6NZL1 1150 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Fgd5Q80UZ0 1219 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 GopcQ8BH60 463 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Mill1Q8HWE7 395 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Rpn1Q91YQ5 608 aaKnown RBP14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Vta1Q9CR26 309 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Tbx18Q9EPZ6 613 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Il21rQ9JHX3 529 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Gm28510A0A087WP28 240 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Gpr161B2RPY5 545 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Ttc17E9PVB5 1198 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Nfxl1E9Q8I7 918 aaKnown RBP14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Itgb5O70309 798 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Idh1O88844 414 aaKnown RBP14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Igsf9Q05BQ1 1179 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Ctc1Q5SUQ9 1212 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 SugctQ7TNE1 436 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Trim7Q923T7 510 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Med24Q99K74 987 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Asb11Q9CQ31 323 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Ddx47Q9CWX9 455 aaKnown RBP14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Mrps9Q9D7N3 390 aaKnown RBP14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 1700109H08RikQ9D9C0 210 aa14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Edf1Q9JMG1 148 aaKnown RBP14.19□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 DgkiD3YWQ0 1071 aa14.18□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Serpinb3aG3X9V8 387 aa14.18□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Vmn2r77L7N2B7 854 aa14.18□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Kcna3P16390 528 aa14.18□□□□□ -0.14
Prpf38b-201ENSMUST00000029480 Eps15P42567 897 aa14.18□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 15.2 ms